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SCNpilot_expt_1000_bf_scaffold_349_25

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 29061..30152

Top 3 Functional Annotations

Value Algorithm Source
MscS Mechanosensitive ion channel n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMK4_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 336.0
  • Bit_score: 297
  • Evalue 1.40e-77
MscS family protein {ECO:0000313|EMBL:GAO41814.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 351.0
  • Bit_score: 328
  • Evalue 1.00e-86
mechanosensitive ion channel MscS; K16052 MscS family membrane protein YnaI similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 336.0
  • Bit_score: 297
  • Evalue 4.40e-78

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1092
ATGGATAGTATTTTTGATAAAATAGTTTTAGATAACAGCATAGGGGACTACACAGTAGTGGCGCTGGTCATCCTCGGAACGGTTGTGCTGAAAAAATTTTTCAGCAAGCCGCTTGCGGCTACCATCATCTGGCTGCTGCAGGTAGTGGGCCGGAAGGTAGACCGCAAAGCGTTCATTGATCTTATCCTCCACCCGCTTGAAGACTTTTTGATGGTCTCTACCTGGTTCCTGGCGCTCGCTTCGCTTCATTTTCCCGGGGTGCTGCAGCGCAATTTTTATCATACCAGTACAAAGATCATTGTTGAACGTATAGCCCTGGCAATAGTGATCGTTTATTTCTTCCGCCTGCTGATAAGAATGATAGATTACCTGGCCTATGTTATCAGCAAAAACGGTGGGGAAGAGCAGGGAGAGAGCCAGCACCAGCTCGTCATTTTTTTTAAAGATTTCCTGAAGGCGATCGTCAGTATTGCCGGCATATTTGTGATCATCAAATTTGCTTTTGGCTACCAGATCTCGGAGCTGCTTACGGGGCTTGGTATTGTGGGCGCAGCGCTTGCCTTGTCGGCAAGGGAAAGTCTCGAAAACCTGATAGCTTCCTTTATCATCTTTTTTGATAAGCCTTTTGCTGTCGGCGACAGCCTGAAGGTCCAGCATGTTACCGGCACGGTGGAAAAGATCGGGCTGCGGAGCACGCGTATACGCACCACTGAAAAAACCTTTGTAAGCGTCCCCAACAAACAAATGGTAGACAGCATACTTGATAACCTGACATTGCGCACTCAGCGGAGGGCTGACCTCAGGCTGGAGCTTGCCACTTCAACAGGCGTACAGCAGGTTGAAGATTTTTTAAAAGGGATGGACCGGGTATTACTGCACCCGAAGATTGAGAAAAAGACAGTCTTTCTCAGTGATATACTACAACAAGGCGGCTATCTTATACACATAGAATACTATGCAGCCCCAATTCCTGTTGATGATTTTAATGCGCTTAAGCAGGAAATAAATCTTGCTACCATTCAGTTGTTGAATACGCTGGATATTCAGCTTGTGACAATACGGAAAGCGGAGATTGAACCACCAAGACACTAA
PROTEIN sequence
Length: 364
MDSIFDKIVLDNSIGDYTVVALVILGTVVLKKFFSKPLAATIIWLLQVVGRKVDRKAFIDLILHPLEDFLMVSTWFLALASLHFPGVLQRNFYHTSTKIIVERIALAIVIVYFFRLLIRMIDYLAYVISKNGGEEQGESQHQLVIFFKDFLKAIVSIAGIFVIIKFAFGYQISELLTGLGIVGAALALSARESLENLIASFIIFFDKPFAVGDSLKVQHVTGTVEKIGLRSTRIRTTEKTFVSVPNKQMVDSILDNLTLRTQRRADLRLELATSTGVQQVEDFLKGMDRVLLHPKIEKKTVFLSDILQQGGYLIHIEYYAAPIPVDDFNALKQEINLATIQLLNTLDIQLVTIRKAEIEPPRH*