ggKbase home page

SCNpilot_expt_1000_bf_scaffold_787_12

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 10252..11508

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA63_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 412.0
  • Bit_score: 403
  • Evalue 3.60e-109
Copper transporter {ECO:0000313|EMBL:KIC89858.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 374.0
  • Bit_score: 413
  • Evalue 2.80e-112
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 412.0
  • Bit_score: 403
  • Evalue 1.10e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter sp. ZG627 → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1257
ATGAAAAGAAAATATTGGCTTTACTTACTTGTAGTTCTTGTTACGACCACGTTCATAGCTGCCTGTAACAGCAATGAAGGTAAAGATACTGCGACATCTTCGGCAACAAAAGACTTATACACTTGCTCCATGCACCCGCAGGTGCTTCAGGACCATCCGGGCAATTGTCCCATTTGCGGCATGAAGCTGATTAAGAAGAATGCGACGCCTGTCGCATTGAATAACATTAACTTGGAGACTTTACTGAAACCCACTAATGAATTTGTAGTCGCATCGCTACCGGTTACTACACCACAGGAAAACAGTGTGTATATTCCGGTAAAAGTGTACGGCACCATTGAAGCCGACACAAGAGCTATGGGAAATATTTCCGCAAGGGTTTCTGGTAGAATAGAAAAATTGTATCTGCGCTATAGATTTCAAAAAGTAACAGCAGGACAAAAAGTTGTAGAAATCTATTCACCGGAACTGCTTACGGCTCAGGAAAACTTATTGTTCCTGTCAAAGAGCGATGCCCAAAACACAGCATTCATTCAGGCTGCCAAACAAAAATTGCTGTTGCTGGGCATGAGTTCAACGGAACTGAACAAAGTGATTGCAACAGGCAAGCCTTTGTATAGTGTAAGCGTTTACAGCAAGTACAGCGGTCATGTACATGATGCAGGGATGATACCTAATACAAGTAGCATGAACGAAAATGAAATGAACAATGCAGCACCGGTTACACAGGAGTTGGCATTGAAGGAGGGCATGTATGTAAACAAAGGTCAAACTATGTTTATGATCATGAACCATCATAAAGCCTGGGCTGCTCTTCAAATTTTTCCCAATCAACAATCTATTATAAAGAAGGGCGACCGGGTGCAAATTATTCCAGAAACAGATACCACGGCTGTTATTAACGGCACGGTTGATTTTGTTGAACCTTTCTTCCGTGGCAGCAGTAAAACAATTACGGCACGGGTGTATTTCCACAACATGGATATGCTCACCATTGGCAGCCAGGTAACGGCAAATATTTTTACCGAAGCTAAAAATGGATTATGGCTACCCCAAACAGCAGTGCTTTCATTGGGCAGGAACGAGGTAGCGTTTTTAAAATCAGATGGAGGCTTTTTAGCGCATAAAGTAACAACCGGCATTCGTTCGGAAGGTAAAGTACAAATACTATCCGGATTAAGCGCAAAAGATACCGTTGCCACCAACGCACAGTATTTAATAGACAGCGAAAGCTTTATTCAAATCGCTTCAAAATAA
PROTEIN sequence
Length: 419
MKRKYWLYLLVVLVTTTFIAACNSNEGKDTATSSATKDLYTCSMHPQVLQDHPGNCPICGMKLIKKNATPVALNNINLETLLKPTNEFVVASLPVTTPQENSVYIPVKVYGTIEADTRAMGNISARVSGRIEKLYLRYRFQKVTAGQKVVEIYSPELLTAQENLLFLSKSDAQNTAFIQAAKQKLLLLGMSSTELNKVIATGKPLYSVSVYSKYSGHVHDAGMIPNTSSMNENEMNNAAPVTQELALKEGMYVNKGQTMFMIMNHHKAWAALQIFPNQQSIIKKGDRVQIIPETDTTAVINGTVDFVEPFFRGSSKTITARVYFHNMDMLTIGSQVTANIFTEAKNGLWLPQTAVLSLGRNEVAFLKSDGGFLAHKVTTGIRSEGKVQILSGLSAKDTVATNAQYLIDSESFIQIASK*