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SCNpilot_expt_1000_bf_scaffold_462_13

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(11745..12491)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031A1174 similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 248.0
  • Bit_score: 437
  • Evalue 7.70e-120
  • rbh
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 247.0
  • Bit_score: 435
  • Evalue 5.40e-119
fliA; putative RNA polymerase sigma factor for flagellar regulon FliA; K02405 RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 247.0
  • Bit_score: 433
  • Evalue 3.50e-119
  • rbh

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGAACCCGGCCGCCCATTACCGCGAAGTCCAGCGCGCCAGCGCCAACGACTGCATCGCCCGCCATTCGGACCTGGTGCGGCGCATCGCCCACCACCTGGCGGCGCGCCTGCCGGCCAGCGTCGAGATCGACGACCTGATCCAGGCCGGCATGATGGGCCTGATCGAAGCCTCGCGCAGCTACGACGCCGAACAGGGCGCCTCGTTCGAGACCTACGCCTCGATCCGCATCCGCGGCTCGATGATCGACGAGATCCGCCGTGGCGACTGGGTGCCGCGCTCGGTGCATCGCCGCACCCGCGATGCCGCCGCCACCATCCGCCGCATCGAACAGAGCACCGGCCGCGCCGCCAGCGCGACCGAGGTGGCGCAGGCCATGGACATGCCGCTGCCCGAGTACATGCGGCTGATCGAGGACGCCGCGCGCGGCCAGGTGCTGAGCCTGGAATCGCGGATCGAGGACCAGGGCGAGCTGGACACGCCGGCCACCGGCGGCCCGACCCCGCAACAGGTGCTCGAGCGCAGCCAGTTCGGCGAGGAACTGGGCAAGGCCATCGGCCAGCTGCCCGAGCGCGAACAGCTGGTGCTGTCGCTGTACTACGAGCAGGAGCTGAACCTGAAGGAGATCGGCGCGGTGCTCGGGGTCAGCGAGTCGCGCGTGTGCCAGATCCACGGCCAGGCCATGCTGCGGCTGCGTGGCCGGCTGAAGATTTTCGAGGCGGCCGACGCCGGCCTCGTCGAACCATGA
PROTEIN sequence
Length: 249
MNPAAHYREVQRASANDCIARHSDLVRRIAHHLAARLPASVEIDDLIQAGMMGLIEASRSYDAEQGASFETYASIRIRGSMIDEIRRGDWVPRSVHRRTRDAAATIRRIEQSTGRAASATEVAQAMDMPLPEYMRLIEDAARGQVLSLESRIEDQGELDTPATGGPTPQQVLERSQFGEELGKAIGQLPEREQLVLSLYYEQELNLKEIGAVLGVSESRVCQIHGQAMLRLRGRLKIFEAADAGLVEP*