ggKbase home page

SCNpilot_expt_1000_bf_scaffold_730_19

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 15171..15845

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Xanthomonadaceae RepID=UPI00029B10E2 similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 215.0
  • Bit_score: 377
  • Evalue 8.60e-102
  • rbh
Membrane protein {ECO:0000313|EMBL:AHY59473.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 219.0
  • Bit_score: 383
  • Evalue 1.70e-103
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 215.0
  • Bit_score: 375
  • Evalue 1.30e-101
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGGGCATACAGCTCCCCCGTTGGGTATGGATCGGCGCGATCGCGCTGTCCTGCGTGGCCGGCATGGTCAACGTGGTCGGCTTCCTCGGCTTCGAGCACCAGGCGGTCAGCCACCTCACCGGCACCACCAGCCAGCTCGGCATGGCGCTGGTGCAGCACGACTGGCGCAGCGTCGCGCACCTGTGGGGCATGCTGATCGCGTTCTCGCTGGGAGCGATGCTGAGCGGGCTCATCGTGCAGGACGGCACGTTGCGGCTGGGCCGTCGCTACGGCGTGGTGCTGACCATCGAATCGCTGTTGCTGCTGGTGGCGATCCCGCTGTTCAAGCAGCAGCAGATCTGGGGCGCGCTGGCCGCGGCCATGGCCTGCGGCCTGCAGAACGCCATGGTCACCACCTTCAGCGGCGCGGTGGTGCGCACCACCCATCTCAGCGGCATGTTCACCGACCTGGGCATCGGCCTGGGCCACCTGCTGCGCGGGCTGCCGCTGCAGATGCGGCGATTGACGCTCAGCGGCCTGATCATCAGCGGCTTCCTGGCCGGCGGCGTCATCGGCGCCTGGCTGTTCCAGCGCTACGGCTACGACGCCCTGCTCGCACCGGCGCTGCTGACCGGCTGCACCGGTGCCACCTACATCATCTACCGGCTGTCCCAGCGCCTGTACACCGCACCCTGA
PROTEIN sequence
Length: 225
MGIQLPRWVWIGAIALSCVAGMVNVVGFLGFEHQAVSHLTGTTSQLGMALVQHDWRSVAHLWGMLIAFSLGAMLSGLIVQDGTLRLGRRYGVVLTIESLLLLVAIPLFKQQQIWGALAAAMACGLQNAMVTTFSGAVVRTTHLSGMFTDLGIGLGHLLRGLPLQMRRLTLSGLIISGFLAGGVIGAWLFQRYGYDALLAPALLTGCTGATYIIYRLSQRLYTAP*