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SCNpilot_expt_1000_bf_scaffold_395_7

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15

near complete RP 48 / 55 MC: 2 BSCG 49 / 51 MC: 5 ASCG 11 / 38
Location: comp(8943..9551)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, luxR family n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UHU4_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 33.2
  • Coverage: 187.0
  • Bit_score: 75
  • Evalue 8.20e-11
Transcriptional regulator, luxR family {ECO:0000313|EMBL:EGP54163.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.2
  • Coverage: 187.0
  • Bit_score: 75
  • Evalue 1.20e-10
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 198.0
  • Bit_score: 74
  • Evalue 5.80e-11

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGTCGCTCCAGTTCGCGGTTCCAGTTCGGCCGGATTGCGCCCCGTTTTCCGGTCGCGGCGACATGCCCCCGGTGGCGACGCCCCATGCGTCGAAGCCGGTCTTCGTCATCGACGCCAGGCTGAACGTCCAGTTCAGCAATCGCGGCGCCCAGGCCCTGCAGAACGACGGGCTGGGCGGCGCGGATCGCTTCACCGCATCCGACAAGGAATTCATGGCGCGGCTGATGTCCTGGCTGAAGCGCTGCGGAACCGGCGGATGGCCGGGCGAGGCGCGTCTGCCGCTCTCGCTTCGCTGCGGACGCCAGGTCGCGATCGAAGCCGTTCACCTCGAGAGCATCGACCTTTTCGTGCTCTCGGTGGACGATCCGGAGATCGCGATGGGCCGCAAGCTCGGCGAGGTCGCCGAAGCCTGCGGTCTGACCCCGACAGAGGAACGCATGCTGGCCCTGATCGTCGAGGGGCTCGACACCATCATCGCAGCCAAGCGGCTTGGCATCGCCCCGACGACCGCGCGCACGCATCTACAGCGACTGTTTGCCAAGACCGGCACGGCGCGTCAGAGCGAACTGGTGCGCTTCGTCGCGACCTATGTCGAGGAGCCCCGCTGA
PROTEIN sequence
Length: 203
MSLQFAVPVRPDCAPFSGRGDMPPVATPHASKPVFVIDARLNVQFSNRGAQALQNDGLGGADRFTASDKEFMARLMSWLKRCGTGGWPGEARLPLSLRCGRQVAIEAVHLESIDLFVLSVDDPEIAMGRKLGEVAEACGLTPTEERMLALIVEGLDTIIAAKRLGIAPTTARTHLQRLFAKTGTARQSELVRFVATYVEEPR*