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SCNpilot_expt_1000_bf_scaffold_241_3

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(2348..2959)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25/general stress protein Ctc; K02897 large subunit ribosomal protein L25 id=12495671 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 204.0
  • Bit_score: 413
  • Evalue 1.70e-112
  • rbh
50S ribosomal protein L25/general stress protein Ctc; K02897 large subunit ribosomal protein L25 similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 203.0
  • Bit_score: 352
  • Evalue 6.50e-95
50S ribosomal protein L25 {ECO:0000255|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000255|HAMAP-Rule:MF_01334}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 203.0
  • Bit_score: 352
  • Evalue 2.90e-94

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGCAAATCGAAGTCATCGCTTTCAAGCGTGATGCGCAGGGATCGAGTGCGAGCCGCCGCCTGCGTCACGCCGGCAAGGTCCCGGGCATCGTCTACGGCGGCGCCGCGGCGCCCCTGCAGATCGAACTGGATCACAATGCGCTCTACCATGCCCTGCGCAAGGAGGCCTTCCATTCGTCTGTGCTGATGCTTACCGTCGACGGCAACAAGGAATCGGTCCTGTTGCGCGACACCCAGTGGCATCCCTACAAACAGCAGGTGCTGCACGTCGATTTTCAGCGCGTCGACAAGGATCACAAGATCCACGTCAAGGTGCCGCTGCACTTCATGAATGCCGAAACCGCGCCCGGTGTGAAGCTGGGCGGCGGCAAGCCGCATCACATCGTGAACGAACTCGACGTGGAATGTCTGCCCGGCAGCCTGCCCGAGTTCATCGAAGTCGATATGGGCGCCCTTGAAGTCGGCCATGCCATTCATGCCAACGATCTCAAGCTGCCCGGCGGCGTCGAGCTGGTGGCACATCTCAAGGCGGAAAACCCTGCGGTGGCCTCGATCAACGCGCCCAAGGGCGGGGTGGCCGAAGACGCGCCGCCGGCCGAGCCTGCGGCCTAA
PROTEIN sequence
Length: 204
MQIEVIAFKRDAQGSSASRRLRHAGKVPGIVYGGAAAPLQIELDHNALYHALRKEAFHSSVLMLTVDGNKESVLLRDTQWHPYKQQVLHVDFQRVDKDHKIHVKVPLHFMNAETAPGVKLGGGKPHHIVNELDVECLPGSLPEFIEVDMGALEVGHAIHANDLKLPGGVELVAHLKAENPAVASINAPKGGVAEDAPPAEPAA*