ggKbase home page

SCNpilot_expt_1000_bf_scaffold_241_6

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(4935..5474)

Top 3 Functional Annotations

Value Algorithm Source
outer membrane lipoprotein LolB; K02494 outer membrane lipoprotein LolB id=12495674 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 369
  • Evalue 1.40e-99
  • rbh
outer membrane lipoprotein LolB; K02494 outer membrane lipoprotein LolB similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 181.0
  • Bit_score: 204
  • Evalue 2.50e-50
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 189.0
  • Bit_score: 210
  • Evalue 2.00e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGTGGCGCGCGTTTGCCGCTTGCCTGCCACTACTGCTGGCAGCATGCGCGACCGTGTCGCCGCCCGCCGCCGAACTGACGGGCGCGGGCTGGCGTTTCAGCGGCCGGATCGGCATTCAGACCGAGACGCAAAGCCTGTCCGGCAATCTGCGCTGGCAGCATCGTGCCGACGCGGACAGTCTTTTCCTGAGTACACCGCTGGGCCAGGGGGTCGCCCGCATCGAGCGCAGCGCCGCCGGCGTCACGCTGGAACTGCCCGATCAGCCGCCCCGCCGGGCACCGGATGCGGAAACCCTCACACGCGATGCGCTGGGCTATGCCTTGCCGGTTGCCGGCCTGGTGTGGTGGATGCAGGCCCGGCCGGACCCCGGTCGGCCGTTCACCGCCGAGCGCGACGACAATGGGCGGCTGGCGCGCCTCGAACAGGACGGCTGGACCATCGACTACCGCCAGTATGTTCAGGACCGGCCGCGCCGGCTCACGCTGATCCGCGAAGATATTGAAATCCGCCTGGTGGCCGACGAATGGCAGACCGAATGA
PROTEIN sequence
Length: 180
MWRAFAACLPLLLAACATVSPPAAELTGAGWRFSGRIGIQTETQSLSGNLRWQHRADADSLFLSTPLGQGVARIERSAAGVTLELPDQPPRRAPDAETLTRDALGYALPVAGLVWWMQARPDPGRPFTAERDDNGRLARLEQDGWTIDYRQYVQDRPRRLTLIREDIEIRLVADEWQTE*