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SCNpilot_expt_1000_bf_scaffold_327_13

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(11105..12169)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] id=12497837 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 355.0
  • Bit_score: 742
  • Evalue 1.60e-211
  • rbh
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 352.0
  • Bit_score: 605
  • Evalue 1.30e-170
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 352.0
  • Bit_score: 605
  • Evalue 5.60e-170

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
GTGATCCTGGTTACCGGAGGCGCCGGTTTCATCGGCGCCAATTTCATCCTGGACTGGCTGCGGCTGCACGACGAGCCGGTGCTCAATCTCGACAAGCTGACCTACGCGGGCAATCTGGCCAGCCTGGCAGGTTTGCAGGGCGATGGGCGCCATGTATTCGTTCGGGGCGACATCGGGGATCGCGGCCTGGTGGCGCGTCTGCTGGCGGAATACCGGCCGCGCGCGATCCTCAATTTCGCCGCCGAATCGCATGTGGACCGTTCGATCCACGGCCCGGAGGATTTCATCCAGACCAACGTGGTGGGGACTTTCCATTTGCTGGAGACGGCGCGCGCCTACTGGGCAGGGCTGTCCGGGGGCGAGCGGGACGCGTTCCGGTTTCTGCACGTATCCACCGACGAGGTCTACGGTTCGCTCGGTCCGCACGACGCGCCCTTTACCGAGACCACGCCCTACGCGCCCAACAGTCCCTATTCCGCAAGCAAGGCGGCATCCGACCATCTGGTGCGTGCCAGCCATCATACCTACGGGCTGCCCACACTCACAACCAACTGTTCCAACAACTACGGGCCTTTCCAGTTCCCGGAAAAGCTGATTCCGCTGATGATCCTGAATGCGCTGCAGGGCAAGCCGCTGCCGGTCTATGGGGATGGCCTTAACGTGCGTGACTGGCTGTATGTGACCGACCATTGCGCGGCGATCCGCGCAGTGCTGGCGTGCGGCCGGACGGGTGAAACCTACAATGTGGGCGGCTGGAACGAAATGCCCAACATCGAAATCGTGCACACCGTTTGTGCCCTGCTCGACGACATGCGCCCCGACCCCCGAGGTCCGCGTGCACGCCTGATTGCGCATGTGCCGGACCGTCCGGGGCACGACCGCCGCTACGCCATCGATGCCGGCAGGATCCATCGCGAACTCGGCTGGAAGCCGGCCGAAACCTTCGGGTCCGGTATCCGCAAGACGGTGAAATGGTATCTGGAGCATGCGGCGTGGACCGATCAGGTGACCAGCGGCGGCTACCGGGAATGGATGAGTCTGAACTATGCGGAGAGGCAGGCGTGA
PROTEIN sequence
Length: 355
VILVTGGAGFIGANFILDWLRLHDEPVLNLDKLTYAGNLASLAGLQGDGRHVFVRGDIGDRGLVARLLAEYRPRAILNFAAESHVDRSIHGPEDFIQTNVVGTFHLLETARAYWAGLSGGERDAFRFLHVSTDEVYGSLGPHDAPFTETTPYAPNSPYSASKAASDHLVRASHHTYGLPTLTTNCSNNYGPFQFPEKLIPLMILNALQGKPLPVYGDGLNVRDWLYVTDHCAAIRAVLACGRTGETYNVGGWNEMPNIEIVHTVCALLDDMRPDPRGPRARLIAHVPDRPGHDRRYAIDAGRIHRELGWKPAETFGSGIRKTVKWYLEHAAWTDQVTSGGYREWMSLNYAERQA*