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SCNpilot_expt_1000_bf_scaffold_327_20

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(18045..19382)

Top 3 Functional Annotations

Value Algorithm Source
lipid A core-O-antigen ligase-like enyme id=12497844 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 446.0
  • Bit_score: 893
  • Evalue 1.20e-256
  • rbh
lipid A core-O-antigen ligase-like enyme similarity KEGG
DB: KEGG
  • Identity: 31.0
  • Coverage: 407.0
  • Bit_score: 190
  • Evalue 1.20e-45
Lipid A core-O-antigen ligase-like enyme {ECO:0000313|EMBL:AGL03932.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.0
  • Coverage: 407.0
  • Bit_score: 190
  • Evalue 5.40e-45

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Taxonomy

Desulfotomaculum gibsoniae → Desulfotomaculum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1338
ATGTTCCAGCTGATTTATGCCTATGTGGCCGGTCTGGGACCATATGTGGCTTTTGCGCTGGCGCTGGGGCTCGGGATTCCCTTTCTGCTGCTTGTTGCCAGACCAGCCCGCTGGCTGATCGCCTTTGCCGTTCTTTTTCTGTGTCTGGTGCCTTTTGGGGGGGGCGAGCTTGCCGGAACCTCAGAAGGCAGCCTGTTCCGCCAAATCGGCTGGGGGTCGGTATTCGTGCTGGCACTTTTTTATGCCTTGCAGGGGGATAAGCGCTTCACGATTCCATGGAGTTGGATCCCCGCGTCTTACTGGCTATTGCTGGCTTACGCACTGGTGTCGGTGGCATGGTCTGTATCGCCGCTGGTTTCCGCAAGGCGCGCGATCCAGCTTGTCGGTGTTTTGTTCATTGCACTGGCACTGGTACGGCAGTCGAGGTCCAGCAATCCATTCGAGACATTCGTATGGCCGGGGGTGCTCTATCTGTTATTGGGGATCGCCGCACTTGCAGTGCCCGGACTGTCGATTGATCCCGATGGCAACTACAAAGGCTTTACTTTCACCAAAAACACGTGGGGACAGTTTGCGCTGCTCATGTCGATGGTGTTTCTTTTTCATGCGCTCGACAAAAGAAAAGGCCGGCTTGCGTGGTGGTTTTTTGCCTTGGCCTCCATATCGCTTCTGGCCACGCGAAGCGCAACCAGTATCGTGATTTATGTAGTCGCTGTTCTCCTGATTCTCTATTGGGTCGCCATGCGGCGCCACGGCAACAAACTTCTTCCCGCTACACTCGTGGCGCTTTTGGCAGGCATGGTGCTTCTGTTTGCCTATTTCTTGATCAAAGGCGATTTGCCTGTTGGCGCTGCCCTGGAAGCTGGCCTGGGGTCGGTTGGCAAAACAACCACGCTTACAGGCCGGACCGAATTGTGGCGCTGGATGGGGTACGAGATTGCCAGACACCCCTGGCTGGGGACGGGATTTGGCGGATTCTGGATGGGGCTGGAAGGGCCTTCGTACAGTATCGTTCGCATGTTCAGCTGGCGTCCGGGGCAGGCACATAATGGCTATATCGATATCGTCAATGAACTCGGATATGTAGGCTTGGCACTGCTCCTGTTGGTGTTTTTGGCTCATCTGAAGAATATTTATTACATCAACCGCATGGGTGATGGACTGACGGCCATTTTTCACTTGGCTATCCTGCTGGTTGTCCTCTTGCTCAATGTGTCGGAAACAAATTTCATGCGTACGACGCATTTGTGGTGGATTGTTTTTTCCACTTCCATCGTGGCGGCTCATGTGTCCATACGTTCAATCCGCTCGAATATTCCCTCGGGTGACAGGGGATGA
PROTEIN sequence
Length: 446
MFQLIYAYVAGLGPYVAFALALGLGIPFLLLVARPARWLIAFAVLFLCLVPFGGGELAGTSEGSLFRQIGWGSVFVLALFYALQGDKRFTIPWSWIPASYWLLLAYALVSVAWSVSPLVSARRAIQLVGVLFIALALVRQSRSSNPFETFVWPGVLYLLLGIAALAVPGLSIDPDGNYKGFTFTKNTWGQFALLMSMVFLFHALDKRKGRLAWWFFALASISLLATRSATSIVIYVVAVLLILYWVAMRRHGNKLLPATLVALLAGMVLLFAYFLIKGDLPVGAALEAGLGSVGKTTTLTGRTELWRWMGYEIARHPWLGTGFGGFWMGLEGPSYSIVRMFSWRPGQAHNGYIDIVNELGYVGLALLLLVFLAHLKNIYYINRMGDGLTAIFHLAILLVVLLLNVSETNFMRTTHLWWIVFSTSIVAAHVSIRSIRSNIPSGDRG*