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SCNpilot_expt_1000_bf_scaffold_418_13

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(8658..8864)

Top 3 Functional Annotations

Value Algorithm Source
cold shock-like protein id=12496848 bin=THIO_MID species=Thauera terpenica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 143
  • Evalue 6.40e-32
cold shock-like protein similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 68.0
  • Bit_score: 128
  • Evalue 6.70e-28
Tax=CG_Hydro_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 69.0
  • Bit_score: 131
  • Evalue 3.50e-28

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Taxonomy

CG_Hydro_01 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGGCAACAGGTACCGTGAAGTGGTTCAACGATTCCAAGGGCTTCGGCTTCATCACCCCCGAGGGCGGCGGTGAAGATCTCTTCGCCCATTTCTCCGCCATCCAGAGCCAGGGCTTCAAGACCCTGACCGAAGGCCAGCGCGTCACCTTCGACGTCACCACCGGTCCCAAGGGCCAGCAGGCGTCCAACATCCGCCCCGCCGAATAA
PROTEIN sequence
Length: 69
MATGTVKWFNDSKGFGFITPEGGGEDLFAHFSAIQSQGFKTLTEGQRVTFDVTTGPKGQQASNIRPAE*