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SCNpilot_expt_1000_bf_scaffold_469_21

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 19533..21113

Top 3 Functional Annotations

Value Algorithm Source
peptidoglycan-binding protein LysM; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] id=12498300 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 517.0
  • Bit_score: 1036
  • Evalue 0.0
  • rbh
peptidoglycan-binding protein LysM; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 508.0
  • Bit_score: 557
  • Evalue 5.80e-156
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 507.0
  • Bit_score: 622
  • Evalue 5.00e-175

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1581
ATGCTCCCTGTCGCAAAACGGGAGCATGGATTGCCCGCCCCCCTGTTCACCCCGCCCGGATTCGGGCGCGCCCTGATCCTGCTGCTGGCCTCGGCCGGGCTGTCCGCACACGCCGCCGGCGGAGCACCCGGGTTCCAGTCGCTGCAATGGCACGCTGAACAAACGGCCGACGCCGACGACCTCTCCGTCGAAACCGCCCCGGTCGAAACGGACGTCTGGCAGCGCATCCGCGACGGTTTCAAGATCGACGCTACAGCCGAACAGAACCCGCTCGTCGCCGTCCAGACCAATTGGTATGCCTCGCGCCCCGACTACGTACAGCGCATCGTCGAACGCGCGCGCCGCTACCTCTACCATATCGTGCAGGAAGTCGACCATCGGGCCATGCCGACCGAGATCGCGCTGCTGCCGATGATAGAGAGCGCATTCAACCCCACCGCGCTGTCCCCGTCCGACGCCTCGGGCATCTGGCAATTCATCCCTGCCACCGGCCGCCACTACGGTCTGAGGCAGGACAGCTGGTACGACGGCCGCCGCGACTTCACCGCCGCGACGAACGCCGCGCTCGATTACCTGGGCAAGCTCTATCTCGATTTCGGCGACTGGCAACTCGCGCTGGCCGCCTACAATTGCGGCGAAGGCTGCGTCGCCCGCGCCATCCAGAAAAATCTGGCACAAGGCCTGCCCACCGACTACGCCAGCCTGCCTCTCCCCGCCGAAACGCGGAATTACGTGCCCAAGCTGCTGGCCATGAAGCGCCTCATCCAGGCGCCCCAACAATTCAGCGTGGCGCTCGATCCCTTGCCCAACCAGCCTTATTTCGAACAGGTCACGGTGCATGCCGCCAACATGGACCTGCAGTCAGCCGCGCGGCTGGCCGGCACGAGCCGCGAGGAATTCCTCGCCCTCAATGCCGCCTTCCCCCGCAAGCTCATTCGAGCGGATGCGCCGGTCAATCTGCTGGTTCCGGCCGGCCAGGCCGACACCTTCCAGCGCAATCTGGAATCGGGCGACTGGGACCGCTGGGAGCCCCACACCGTACAACGCGGCGAACGGCCCGCAACGCTGGCCAAACGCTTTGGCATCAGCCTCGAACGTCTGGAAAGCCACAATCAGTTCCATCTCAGGAACGGCCGGTTCGTCCGGGCGCAGACCATCCTCGTGCCCGTCCGACAGCGTGCGGCAGCAGGCATCGCAACACGCTCCGTCCCGACCGGCGACTACCAGGCACAACGCGGCGACACCCTCTACGGCATCGCCCGCAACCGGGGACTCACCGTGGCGCAGATCCTCGCCGCCAATCCCGATTTCGACGGCATGCTCAAGCCGGGGCAAATCCTGAAACTGCCGGCGGGTACCGAACCCGAGACCCTGGCCGAGCCCGTCCGCAAGGTTGCTTTTGCGCCGCGTGCCGAAAAACTGGCCGCACCCCGCCATTACACCGTCCGAAGCGGCGACACCCTGCACGCGATCGCCGATCGCTTCGACGTGAGCCTCGCGAATCTCAAGGCCTGGAATCCTGCCGTGCGGAAAAGCAGCACCATCCGTCCCGGCCAGCGCCTCACCGTCAAACGCCCCTGA
PROTEIN sequence
Length: 527
MLPVAKREHGLPAPLFTPPGFGRALILLLASAGLSAHAAGGAPGFQSLQWHAEQTADADDLSVETAPVETDVWQRIRDGFKIDATAEQNPLVAVQTNWYASRPDYVQRIVERARRYLYHIVQEVDHRAMPTEIALLPMIESAFNPTALSPSDASGIWQFIPATGRHYGLRQDSWYDGRRDFTAATNAALDYLGKLYLDFGDWQLALAAYNCGEGCVARAIQKNLAQGLPTDYASLPLPAETRNYVPKLLAMKRLIQAPQQFSVALDPLPNQPYFEQVTVHAANMDLQSAARLAGTSREEFLALNAAFPRKLIRADAPVNLLVPAGQADTFQRNLESGDWDRWEPHTVQRGERPATLAKRFGISLERLESHNQFHLRNGRFVRAQTILVPVRQRAAAGIATRSVPTGDYQAQRGDTLYGIARNRGLTVAQILAANPDFDGMLKPGQILKLPAGTEPETLAEPVRKVAFAPRAEKLAAPRHYTVRSGDTLHAIADRFDVSLANLKAWNPAVRKSSTIRPGQRLTVKRP*