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SCNpilot_expt_1000_bf_scaffold_136_9

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(10533..11495)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcription regulator protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IXN4_HERSS similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 319.0
  • Bit_score: 342
  • Evalue 3.30e-91
  • rbh
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 319.0
  • Bit_score: 342
  • Evalue 1.10e-91
  • rbh
AraC family transcription regulator protein {ECO:0000313|EMBL:ADJ64136.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 319.0
  • Bit_score: 342
  • Evalue 4.70e-91

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Taxonomy

Herbaspirillum seropedicae → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGGACCTGGGCAGCGGCGCAAACGAATGGGATGGCGACGGCGAATCGGGCCTGAACGGCCATCGCCTGCTGCCGCGCGTGCACATCCCGGCGGACTGGGCGCGCATGGTCCGGGTGCACGACCTCGATCAGGACATCACCATCGGGTGCTGGAGCGGGCAACCGTCGAGCGGACTGGACATCGAGGCCGAGGGCCCGGCCATGTTCTGCATCGGCATCCTGCTGGAGGGGCAGGCGAGCATGGCGCTCAACGGCGGGCCGCCCCTGCACCTGCATACCGGCATGGCGGTGGTGCAGACGGCGGACCGGCCGGCCGCCGGACGCTTCGCGATGCTTGGCGGCAGACCCAGCCGTCTCGTGGACATCCGCTTCACCCTGGACGGTCTGCGCCGCGCCGGCGGACGTCCCCTGCTCGCCCTGCAGGGGCGGTTCCTGCAGGACTGCAGCCTGCCGCAGGCACACACGCTGATGGGAGGATTCCCGGCGCCGGCCTCGTTGCTGCGCGTGGCCACCGACATCCTGACCTGCGACTTCGCGGACGAGACCGTGCGCTCGCTCTACCTGCATGCCAAGGCGCTGGAAGCCCTGGCGATCGTCCTGCAGACGGTGGGTTCGGCATCGCCTCGATCGGCCTTCTCGCGCGAGCGCGCGCGGCTCCTGCAGGCCCGCCGGCTGCTCGACGAGCGCTTCGAAGAGGACTGGACGCTCGTGCGGCTGGCACGGGAAGTCGGGCTCGGCGAAAAGAAACTGCGGGCCGGGTTCCGTGCCATGGCCGGCCGTTCGGTGCACGAGCACCTGCGCGAGGTGCGCCTGTCGACCGCGGCAGCGATGCTGGCCGGCGGCACCGGCGTGACGCAAGCCGCGCTGGCCGTGGGCTTCGCGAGCCTCAGCCATTTCAGCAAGGCGTTCAAGCTCTCCCGGGGTGTCCTGCCGCGCGACTGGTCGAGGTCGTGCAAATGCTGA
PROTEIN sequence
Length: 321
MDLGSGANEWDGDGESGLNGHRLLPRVHIPADWARMVRVHDLDQDITIGCWSGQPSSGLDIEAEGPAMFCIGILLEGQASMALNGGPPLHLHTGMAVVQTADRPAAGRFAMLGGRPSRLVDIRFTLDGLRRAGGRPLLALQGRFLQDCSLPQAHTLMGGFPAPASLLRVATDILTCDFADETVRSLYLHAKALEALAIVLQTVGSASPRSAFSRERARLLQARRLLDERFEEDWTLVRLAREVGLGEKKLRAGFRAMAGRSVHEHLREVRLSTAAAMLAGGTGVTQAALAVGFASLSHFSKAFKLSRGVLPRDWSRSCKC*