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SCNpilot_expt_1000_bf_scaffold_136_18

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(24277..25275)

Top 3 Functional Annotations

Value Algorithm Source
ntrB; nitrogen regulation (sensor histidine kinase) transcription regulator protein (EC:2.7.1.-); K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 340.0
  • Bit_score: 422
  • Evalue 1.40e-115
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 340.0
  • Bit_score: 422
  • Evalue 6.30e-115
signal transduction histidine kinase n=1 Tax=Herbaspirillum lusitanum RepID=UPI0003742F8F similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 340.0
  • Bit_score: 423
  • Evalue 1.50e-115

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Taxonomy

Herbaspirillum seropedicae → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
GTGGCCGTGCTCGATGCCGGCGGCGGCATCGTGTTCCTGAACCAGGCCGCCGAGCAGCTGCTCGGCGTGTCCCTGCGCTTCGTGACGGGCCAGCCGTTCGCGCGCCTGTTCGTCCACGGCGAGGCCCTCGAGCAGCTGTGCGCCGAGGCGCGCAGCGGCGCCTTCGAGGAGAAACGCACCGATCTCGTGCTCGAGCGCCCCGGGCGCGAGGCGCAGCAGTTCGCCGTCACCGCGGTGGTGCTGCAGGACGGCCCGGGCACGCTGCTGCTCGAGCTGCACGAGCGCGACCAGCGCTGGCGCGCCGATCGCGAGGCGCGCCTGCTGGAGTCGGCCCAGGCCAACCGCGAGCTGGTGCGCAATCTCGCGCACGAGATCAAGAACCCGCTCGGCGGCCTGCGCGGCGCGGCGCAGCTGCTCGAGTCCGAGCTGAAGGCGCCGGCGCTGCGCGAGTACACCCAGGTGATCATCAAGGAGGCCGACCGGCTGCAGGGGCTGGTCGATCGCCTCCTCGCGCCGCACCGGCATCCGCGCATCGTGGGCGACGTGAACATCCACGAGGTCTGCGAGCGGGTGCGCTCGGTGGTGCTGGCCGAGTTCCCGCAGGGGCTGGTCATCGCACGCGACTACGATGCGAGCCTGCCGGAGTTCCGCGGCGATCGCGAGCAGCTGATCCAGGTGCTGCTGAACCTGGTGCGCAATGCCGCGCAGGCGATGCAGGGGCGCGGCGAGATTCTGCTGCGCACGCGCATCGCGCGCCAGGTGACGATCGCCGGTACCCGCTGGAAGCTGGCACTGGATTTGCATGTGATCGACAACGGCCCCGGCGTGCCGGAAGAGATCGGCGACCGGATCTTCTTTCCCCTCGTGACGGGCCGCGACGGCGGAAGCGGGCTCGGGCTCACCCTCGCGCAGACCTTCGTGCAGCAGCACGGGGGCCTGATCGAATGCGAGAGCCGGCCCGGGCGCACCGACTTCCGGATTCTGCTGCCCTTGCCGTGA
PROTEIN sequence
Length: 333
VAVLDAGGGIVFLNQAAEQLLGVSLRFVTGQPFARLFVHGEALEQLCAEARSGAFEEKRTDLVLERPGREAQQFAVTAVVLQDGPGTLLLELHERDQRWRADREARLLESAQANRELVRNLAHEIKNPLGGLRGAAQLLESELKAPALREYTQVIIKEADRLQGLVDRLLAPHRHPRIVGDVNIHEVCERVRSVVLAEFPQGLVIARDYDASLPEFRGDREQLIQVLLNLVRNAAQAMQGRGEILLRTRIARQVTIAGTRWKLALDLHVIDNGPGVPEEIGDRIFFPLVTGRDGGSGLGLTLAQTFVQQHGGLIECESRPGRTDFRILLPLP*