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SCNpilot_expt_1000_bf_scaffold_148_1

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(71..1213)

Top 3 Functional Annotations

Value Algorithm Source
carnitine dehydratase n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002F1A06C similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 375.0
  • Bit_score: 517
  • Evalue 1.20e-143
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW93892.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 380.0
  • Bit_score: 512
  • Evalue 5.30e-142
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 379.0
  • Bit_score: 501
  • Evalue 2.10e-139
  • rbh

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Taxonomy

Ralstonia pickettii → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1143
ATGGGGCCTCTGGCTGGTATCAGGATCGTGGAATTCGCCGGGATCGGCCCGGGCCCCATGTGTGCGATGCTTCTCGCGGATATGGGCGCCACGGTCCTTCGGGTAGCTCGCAAGGGGCCTACGGGGCTGGGAATACAGCGCCCGTTGTCGCACGACCTCCTGTTGCGCAATCGATATTCCATCGAGGTCGACCTGAAACGGCCGGAATCCATTTCGCTCGTGCTCGATCTCGTCGGAAAGGCGGACGCCCTCATCGAGGGTTTCCGGCCCGGCGTGATGGAGCGGCTGGGTCTGGGGCCGGACATCTGCCTGGGCAGGAACCCGAGACTGGTGTACGGCCGCATGACTGGCTGGGGGCAGACCGGTCCGCTCGCACATGCGGCGGGCCATGACATCAACTACGTGGCGGTGACCGGCGTTCTGGCTGCGATTGGTCGCCGGAATCAATTGCCGTCCGTTCCCCTGAATCTCGTCGGTGACTTTGGCGGTGGATCCATGTACCTGGCAATGGGGATCCTCGCTGCGTTGCTCGAAGCGCGTTCATCCGGCAAGGGGCAGGTGGTCGACGCGGCCATCGTCGACGGCACGGCATCGCTCGCGACCCTGCAGTACGGCATGCATGGTGCCGGTGTGCAGAGCGAAGTCCGGGGCGACAATGTCCTCGACACCGGGGCGCATTTCTACGATGTCTACGAGTGCGCCGACGGCAAGTTGATTTCGATCGGTCCGATCGAAGGCAGGTTCTATGCGGAACTGCTCCGCTTGCTGGAAATCGATGCCGCGACCATCGGACCGCATCTCGATCGGGCCAGTTGGCAGACCGGCCATGAGGTGATCGCCGGCAAATTCATGAAGCACACACGGAAGCACTGGTGCGAATTGCTGGAAGGTACTGATGTGTGCTTTGCGCCGGTGCTGACCTGGTCCGAGGCGCCGAACCACCCGCACCTCGAGGCGCGGGGCACTTTCGTCGAGGTTGCCGGCGTCACACAACCGGCGCCTGCGCCACGGTTCAGCCGTACGGTCTCCGCCAGGCCGACCCCGCCCCAGCCGGTGACGCGGGAAAACACCGCGAAAGCACTCTCGGCCTGGTTGGACACGGACGAGATCGAAGCGCTTTTCCGGGCATCGGTCATCGACTGA
PROTEIN sequence
Length: 381
MGPLAGIRIVEFAGIGPGPMCAMLLADMGATVLRVARKGPTGLGIQRPLSHDLLLRNRYSIEVDLKRPESISLVLDLVGKADALIEGFRPGVMERLGLGPDICLGRNPRLVYGRMTGWGQTGPLAHAAGHDINYVAVTGVLAAIGRRNQLPSVPLNLVGDFGGGSMYLAMGILAALLEARSSGKGQVVDAAIVDGTASLATLQYGMHGAGVQSEVRGDNVLDTGAHFYDVYECADGKLISIGPIEGRFYAELLRLLEIDAATIGPHLDRASWQTGHEVIAGKFMKHTRKHWCELLEGTDVCFAPVLTWSEAPNHPHLEARGTFVEVAGVTQPAPAPRFSRTVSARPTPPQPVTRENTAKALSAWLDTDEIEALFRASVID*