ggKbase home page

SCNpilot_expt_1000_bf_scaffold_148_7

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 6385..7296

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1E4_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 38.2
  • Coverage: 309.0
  • Bit_score: 188
  • Evalue 1.00e-44
Uncharacterized protein {ECO:0000313|EMBL:KDP87443.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 291.0
  • Bit_score: 291
  • Evalue 1.50e-75
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 309.0
  • Bit_score: 188
  • Evalue 3.10e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cupriavidus sp. SK-3 → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGACAGACAGCCGGCCCAATCTCGAGGCCCTTCGGCTCTTCGTGAAAGTGGCCGAACTGGGCAACCTGTCGCATGCGGCAGCCGTCATCGGCACCACGCAACCGTCCGTGAGCCGGGCGCTGCGCGCGCTCGAGGACAGCCTGCAGGCGGCGCTCTTTCACCGCACCGGCCGCGGCGTGAAGCTCACGGAGGTCGGCGAGCAGACCCTGCTGAGGGCCCGGGCGCTGCTGGCCCATGCCGACCAGTTCTCGGCCGACATCCGCGACCAGACGCGCACGCCGACCGGCACGGTGACGGTGGCGCTCCTGACCATGTACATGCAGATGCTGGCCGCCGACCTCTTCGAGGAGGTGCGCCGGCAGTTTCCCGGCATCGTGCTGCGCCTGCTGGAGAGCTTCAGCGTGCAGCACGAGGACTGGCTGTCGAACGGCTGGGTCGACATCGCGCTGGTCACCCGCTATCGCAGGACGGGCCTGGACAAGCAGGAGGTGCTCGCCACGTCGGACGTGATGGTGGTGGGCAACCCCGATCTCGGGGAAAAGGGCGACGAGCTGCCCTTCCAGGCACTGGCATCGATACCGCTGGTGCTGCCGGCCTCGCCGAACGGACTGCGACTCTGCGTCGACGAGGAAGCCCGCCGCCGCGGGTTCCGCCTGAACGTCGTGCTCGAGGCCGACTCGGTCGAAGCCCAGCACGCGATCATCTCGCGCGAGCGCTGCTACGCGCTCTGGAGCGAAAACTCAGTGCGGCTGCAGCGATTCGACGCGTCTTTTGCGGCGCGCCGCATCATCGATCCCAGGCTGCCCCGCAGCGTGATGATGAAGACCACGACCCACCACCCGCTCAGCCGCGCGTCGCGCGAGGTCGCGCGGATCCTGCGTCGCCTGGTCCTCGCGGTCCATGCCTCGTAG
PROTEIN sequence
Length: 304
MTDSRPNLEALRLFVKVAELGNLSHAAAVIGTTQPSVSRALRALEDSLQAALFHRTGRGVKLTEVGEQTLLRARALLAHADQFSADIRDQTRTPTGTVTVALLTMYMQMLAADLFEEVRRQFPGIVLRLLESFSVQHEDWLSNGWVDIALVTRYRRTGLDKQEVLATSDVMVVGNPDLGEKGDELPFQALASIPLVLPASPNGLRLCVDEEARRRGFRLNVVLEADSVEAQHAIISRERCYALWSENSVRLQRFDASFAARRIIDPRLPRSVMMKTTTHHPLSRASREVARILRRLVLAVHAS*