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SCNpilot_expt_1000_bf_scaffold_148_15

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(13636..14508)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 291.0
  • Bit_score: 352
  • Evalue 5.40e-94
rnc; dsRNA-specific ribonuclease (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 302.0
  • Bit_score: 349
  • Evalue 1.30e-93
Ribonuclease 3 n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0EFC1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 291.0
  • Bit_score: 352
  • Evalue 3.80e-94

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Taxonomy

Herbaspirillum frisingense → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGAGCCTCGACGACCTGCAGCAGCAACTCGGGCATCGCTTCGCCGATGTCTCGCTGCTGCAGCAGGCGTTGACGCATCGCAGCCACGGCCAGCCCAACAACGAGCGGCTCGAGTTCCTCGGCGACTCGGTGCTCAACTGCGTGGTGGCGGCGATGCTGTACCGCCACTTCGGGCGCATCGACGAGGGCGATCTGTCGCGGCTGCGCGCCAACCTGGTCAAGCAGCAGTCGCTCTACGAGATCGCGCAGCGCCTGGGGCTGAGCCAGCACCTGCTGCTGGGCGAGGGCGAGCTCAAGAGCGGCGGCTTCCGGCGCCCGTCCATCCTCGGCGATACGCTCGAGGCGATCGTCGGGGCGGTGTTCCTCGATGCCGGCTTCGAGGCGGCGCAGGCGGTCATCGGCACGCTCTACGAGCCCATCATCAAGACGGTCGACCCGCGCACGCTCGGCAAGGACGCCAAGACGCTGCTGCAGGAGTACCTGCAGGGCAGGAAGCTGCCGCTGCCGGTGTACGCCGTGGTGGCCACGCACGGCGCCGCCCACAGCCAGGTGTTCGAGGTCGAGTGCGCGATCCCCAAGCTGCAGATCCAGGTGCTCGGCAGCGGTGCCAGTCGCCGCGCCGCCGAGCAGGCCGCGGCGCGCGGCGCGCTCGAGGCGGCGCAGGCGCTGGCGCCGGCCGGCGGGCGGCGCGCGCGCACGCGGGCCGAGAAAGCGGAGAAGGTGGACAAGGCAGAGCGGACGGAGAAGGGCGAACGAACCGAGAAGGTCGAGAAGACCGAGCGGGCGGAAAGGACCGACAAGGCCGAGGGAGCCGAGCGCGGCGCGCGTCCCGACAAGGCCGCCGAGGCACCCGGCCACACGGTGCACGCCTGA
PROTEIN sequence
Length: 291
MSLDDLQQQLGHRFADVSLLQQALTHRSHGQPNNERLEFLGDSVLNCVVAAMLYRHFGRIDEGDLSRLRANLVKQQSLYEIAQRLGLSQHLLLGEGELKSGGFRRPSILGDTLEAIVGAVFLDAGFEAAQAVIGTLYEPIIKTVDPRTLGKDAKTLLQEYLQGRKLPLPVYAVVATHGAAHSQVFEVECAIPKLQIQVLGSGASRRAAEQAAARGALEAAQALAPAGGRRARTRAEKAEKVDKAERTEKGERTEKVEKTERAERTDKAEGAERGARPDKAAEAPGHTVHA*