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SCNpilot_expt_1000_bf_scaffold_148_27

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(25267..25449)

Top 3 Functional Annotations

Value Algorithm Source
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 id=12497580 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 59.0
  • Bit_score: 118
  • Evalue 3.30e-24
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 60.0
  • Bit_score: 117
  • Evalue 1.80e-24
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 60.0
  • Bit_score: 117
  • Evalue 6.10e-24

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Taxonomy

Achromobacter sp. RTa → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 183
ATGGCCGTCCAGCAAAACAAGAAGTCGCCGTCCAAGCGCGGCATGCACCGCGCGCACGACTTCCTCGCGCAGCCGCCGCTGGCGGTCGAGCCGACGAGCGGGGAAGTTCACCTGCGCCATCACGTCAGTCCCAACGGCTTCTACCGCGGCCGCAAGATCCTGAAGACCAAGGCCGACGAGTAA
PROTEIN sequence
Length: 61
MAVQQNKKSPSKRGMHRAHDFLAQPPLAVEPTSGEVHLRHHVSPNGFYRGRKILKTKADE*