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SCNpilot_expt_1000_bf_scaffold_314_1

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 1..483

Top 3 Functional Annotations

Value Algorithm Source
Predicted DNA-binding protein with PD1-like DNA-binding motif n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K4K0_CUPNH similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 131.0
  • Bit_score: 151
  • Evalue 9.40e-34
Putative DNA-binding protein {ECO:0000313|EMBL:AIO28982.1}; TaxID=983594 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia ATCC 25416.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 131.0
  • Bit_score: 152
  • Evalue 4.50e-34
DNA-binding protein; K06934 similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 131.0
  • Bit_score: 151
  • Evalue 2.90e-34

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Taxonomy

Burkholderia cepacia → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
AACCTGCAATACGCGCTAGTGGCGATCGTCTCGAAAGCCAGCATCGGTGCGGGGTGGCGGGTTGTTCAGGTCCGACTAACTAGCATGCAGTTCTTACCCGTCCGGCTCTCTCCAGGCGCAGACCTTCGTCGTACCTTACAAGACGACGTGGGGAGTCTGAATACAGATTCAGCCTTCGTTGTTGCGGGCATCGGCAGCCTGGTCGAGGCCAGTATTCGGTACGCGGGTGAATCCAAAGAGACCGTGCTTGCGGGTCCGCTCGAGATCCTGAGCCTATCGGGGAGTCTCAGCCCCGCAGGCGCACACCTGCACATGTCTGTCTCCGATGCGTCTGGTCGCGTGTATGGTGGCCATGTTGGCTATGGCAACACGATCAGAACGACAGCAGAGATTCTCCTGGCACTCCTACCAGATGGGTCTCTCACGCGTGAACACGACGCAAAAACCGGGTTCAACGAGTTGGTTGTCCGCCATCGGTTGTGA
PROTEIN sequence
Length: 161
NLQYALVAIVSKASIGAGWRVVQVRLTSMQFLPVRLSPGADLRRTLQDDVGSLNTDSAFVVAGIGSLVEASIRYAGESKETVLAGPLEILSLSGSLSPAGAHLHMSVSDASGRVYGGHVGYGNTIRTTAEILLALLPDGSLTREHDAKTGFNELVVRHRL*