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SCNpilot_expt_1000_bf_scaffold_416_3

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 2383..2694

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit beta n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0D0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 97.0
  • Bit_score: 192
  • Evalue 2.40e-46
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 97.0
  • Bit_score: 192
  • Evalue 3.30e-46
integration host factor beta-subunit similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 100.0
  • Bit_score: 190
  • Evalue 2.80e-46

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGATCAAATCCGAGCTGGTTCAGCGCATCGCCGAACATAATCCCCACCTCTATCAAAGAGACGTGGAGAACATTGTGAACGCGATTCTCGATGAAATCGTCGCCGCGCTTGCGCGCGGCGATCGGGTCGAGCTGCGTGGTTTTGGCGCGTTTTCAGTCAAGCATCGTCCGGCCCGCGCCGGACGCAATCCGCGGACCGGCGCGCATGTCCCGGTCGAGCAGAAGAGCGTGCCGTTCTTCAAGACCGGCAAGGAAATGCGCGAACGGCTCAACCGCGACAACGACGGCCAGGGCGATCTCGGCGCGAACTGA
PROTEIN sequence
Length: 104
MIKSELVQRIAEHNPHLYQRDVENIVNAILDEIVAALARGDRVELRGFGAFSVKHRPARAGRNPRTGAHVPVEQKSVPFFKTGKEMRERLNRDNDGQGDLGAN*