ggKbase home page

SCNpilot_expt_1000_bf_scaffold_416_22

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 25981..26862

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 293.0
  • Bit_score: 513
  • Evalue 1.80e-142
mutM; formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 293.0
  • Bit_score: 482
  • Evalue 7.80e-134
Formamidopyrimidine-DNA glycosylase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0F0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 293.0
  • Bit_score: 513
  • Evalue 1.30e-142

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGCCCGAACTGCCCGAGGTTGAAACCGTCCGCCGCGGCCTGCAGCCGGTGATGGAGGGGCGGATCATCCGGCAGGTCGAGCTACGGCGCGGCGATCTGCGCTTTCCGCTGCAGAAGGATTTCGTCGCCCGGCTGGAAGGGCAGAAGGTGATCGGCCTCGGCCGCCGCGCCAAATATCTGCTCGCCGATCTCGCCTCCGGCGACGTGCTGCTGATGCATCTGGGCATGTCCGGCTCGTTCCGGGTGATGCAGGATCGGGGCGAGCGGACGCCCGGCGAATTTCATTATCCGCGCAGCGAGAATCGCACCCACGATCATGTGGTGTTTCACATGGCCTCCGGCGCGGTGATCGCGTTCAACGATCCGCGCCGTTTCGGCTATATGAAGATCGTGCCGCGCAGCGAGCTTGCCATCGAACCGCTGCTGCGCGGGCTCGGTCCCGAGCCGCTCGGCAACGAATTCGACGCCGCGATGCTGGCGAGCGCCTGCGCCGGCAAGAAAACCTCGCTGAAAGCGGCGCTGCTCGACCAGCGCGTGGTGGCGGGGCTCGGCAACATCTATGTCTGCGAGGCGCTGTTTCGTGCGCATCTGTCGCCGAAGCGCGAAGCCTCGACGCTCGCCGCCCGCAACGGCACGCCGACCGATCATGCCAAACGGCTGGTGTCGGCGATTCACAGCGTGCTCAACGCCGCGATCGAGGCCGGCGGCTCGTCGCTGCGCGATCATCGCCAGACTTCCGGCGAGTTCGGCTATTTCCAGCATTCGTTTCAGGTCTATGACCGCGAAAGCGAGCCGTGCAAAACGCCGCGCTGCGGCGGCACCGTGAAACGCTTCACCCAGAACGGCCGCTCGACCTTCTGGTGCCCGAAATGTCAGAAGTGA
PROTEIN sequence
Length: 294
MPELPEVETVRRGLQPVMEGRIIRQVELRRGDLRFPLQKDFVARLEGQKVIGLGRRAKYLLADLASGDVLLMHLGMSGSFRVMQDRGERTPGEFHYPRSENRTHDHVVFHMASGAVIAFNDPRRFGYMKIVPRSELAIEPLLRGLGPEPLGNEFDAAMLASACAGKKTSLKAALLDQRVVAGLGNIYVCEALFRAHLSPKREASTLAARNGTPTDHAKRLVSAIHSVLNAAIEAGGSSLRDHRQTSGEFGYFQHSFQVYDRESEPCKTPRCGGTVKRFTQNGRSTFWCPKCQK*