ggKbase home page

SCNpilot_expt_1000_bf_scaffold_493_5

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 1997..2287

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L23 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH68_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 99.0
  • Bit_score: 183
  • Evalue 1.30e-43
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 99.0
  • Bit_score: 183
  • Evalue 1.90e-43
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 99.0
  • Bit_score: 178
  • Evalue 1.40e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGAGCACTCAAGACTCGCGCCATTACGACATCATTGTCTCGCCGGTGATCACCGAGAAGGCGACCACTGCCTCCGAGCACAACAAGGTCGTGTTCAAGGTTGCGGCGAAGGCGACCAAGCCGCAGATCAAGGAAGCGATTGAGAAGCTGTTCGACGTCAAGGTGAAGGGCGTCAACACGCTGGTCAAGACGAAGGTCTTCCGCGGCCAGTTCGGGTCTCAGTCGGATACCAAGCGTGCGATCGTGACTCTTGAAGAGGGTCACCGCATCGACGTGACCACCGGACTGTAA
PROTEIN sequence
Length: 97
MSTQDSRHYDIIVSPVITEKATTASEHNKVVFKVAAKATKPQIKEAIEKLFDVKVKGVNTLVKTKVFRGQFGSQSDTKRAIVTLEEGHRIDVTTGL*