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SCNpilot_expt_1000_bf_scaffold_493_6

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 2299..3165

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L2 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJP8_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 274.0
  • Bit_score: 551
  • Evalue 5.60e-154
  • rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 274.0
  • Bit_score: 551
  • Evalue 7.80e-154
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 274.0
  • Bit_score: 539
  • Evalue 6.90e-151
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGGCACTGAAAACATTCAACCCGACGACGCCTGGCCAGCGCCAGCTCGTGATGGTGGATCGCTCGGCGCTCTACAAGGGCAAGCCGGTCAAGAAGCTCACCGAGGGCAAGCACTCGAACGGTGGTCGTGGCAACACCGGTCGCATCACCGTGCGTTTCCGCGGCGGCGGCCACAAGCAGGCTTATCGTCTGGTCGACTTCAAGCGCACCAAGCTCGATGTCGCCGGCACGGTCGAGCGTCTCGAATACGATCCGAACCGCACCGCGTTCATCGCGCTGATCAAGTACGCCGATGGCGAGCAGGCCTACATCCTGGCGCCGCAGCGTCTGGCGGTCGGCGACACCGTGATCGCCGGCAGCTATGTCGACGTGAAGCCCGGCAACGTCATGCCGATGGGCAATATGCCGGTCGGCACCATCGTCCACAACGTCGAGATGAAGATCGGCAAGGGCGGTCAGATCGCGCGTTCCGCTGGCACCTACGCCCAGATCGTCGGCCGCGACCACGACTACGTCATTCTGCGCCTCAACTCGGGCGAGCAGCGCATGGTTCACGGTCGTTGCACCGCGACCATCGGTGCGGTGTCGAACCCGGACCACATGAACACGTCGATCGGCAAGGCCGGTCGCAAGCGTTGGATGGGCCGTCGCCCGCACAACCGCGGCGTTGTCATGAACCCGATCGACCATCCGCACGGCGGCGGTGAAGGCCGCACCTCGGGCGGCCGTCATCCGGTCACCCCGTGGGGCAAGCCGACCAAGGGCAAGAAGACGCGGTCGAACAAGTCGACCAACAAGTTCATTCTCATCAGCCGCCACAGGATCGCCGGACATGGTTCGTTCAGTCTGGAAAGGCCCGTTCGTTGA
PROTEIN sequence
Length: 289
MALKTFNPTTPGQRQLVMVDRSALYKGKPVKKLTEGKHSNGGRGNTGRITVRFRGGGHKQAYRLVDFKRTKLDVAGTVERLEYDPNRTAFIALIKYADGEQAYILAPQRLAVGDTVIAGSYVDVKPGNVMPMGNMPVGTIVHNVEMKIGKGGQIARSAGTYAQIVGRDHDYVILRLNSGEQRMVHGRCTATIGAVSNPDHMNTSIGKAGRKRWMGRRPHNRGVVMNPIDHPHGGGEGRTSGGRHPVTPWGKPTKGKKTRSNKSTNKFILISRHRIAGHGSFSLERPVR*