ggKbase home page

SCNpilot_expt_1000_bf_scaffold_493_8

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 3420..3806

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L22 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PG06_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 128.0
  • Bit_score: 239
  • Evalue 2.10e-60
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 128.0
  • Bit_score: 239
  • Evalue 2.90e-60
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 128.0
  • Bit_score: 236
  • Evalue 5.60e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGAGCAAACCTAAGCGCGAACGGGTTCTCCCGGATAACGAAGCCAAGGCCGTCGCCCGCATGCTGCGGGTCAGCCCGCAGAAGCTCAATCTGGTGGCGCAGCTCATCCGCGGCCGCAGGGCTTCGGCGGCGCTCGCCGACCTGCAGTTCTCGCGCAAGCGGATCGCGGTCGACGTCAAGAAGTGCCTGGAGTCCGCGATTGCGAACGCCGAGAACAACCACGACCTCGATGTCGACGCGCTCGTCGTCGCCGAGGCGCATGTCGGCAACGGCATTGTCATGAAGCGTTTCGCACCGCGCGGCCGTGGCCGTTCGGGCCGTGTATTCAAGCCGTTCTCGCAGCTGACGATCGTTGTTCGTCAGGTCGAGGCGGAGGCGAGCGCTTAA
PROTEIN sequence
Length: 129
MSKPKRERVLPDNEAKAVARMLRVSPQKLNLVAQLIRGRRASAALADLQFSRKRIAVDVKKCLESAIANAENNHDLDVDALVVAEAHVGNGIVMKRFAPRGRGRSGRVFKPFSQLTIVVRQVEAEASA*