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SCNpilot_expt_1000_bf_scaffold_493_9

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 3826..4524

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCN5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 233.0
  • Bit_score: 450
  • Evalue 8.30e-124
  • rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 233.0
  • Bit_score: 450
  • Evalue 1.20e-123
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 235.0
  • Bit_score: 446
  • Evalue 4.90e-123

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGGTCAGAAGATCAATCCAATCGGGCTGCGCCTGGGCATCAATCGGACCTGGGATTCCCGTTGGTTCGCCGGCAAGAACGAATACGCCAAGCTCCTCCACGAGGACGTGCGCATTCGCGAGATGCTGATGAAGGAGCTGAAGCAGGCGGCCGTGGCGCGCATCGTGATCGAGCGCCCGCACAAGAAGTGCCGCGTGTCGGTTCATTCCGCGCGTCCCGGCGTCGTCATCGGCAAGAAGGGCGCCGACATCGACAAGCTGCGCAAGAAGGTCGCCGAGATCACGTCCTCGGACGTCGTCATCAACATCATCGAAATCCGCAAGCCGGAGCTCGATGCCACGCTGGTCGCCGAATCGATCGCGCAGCAGCTTGAGCGCCGCGTCGCGTTCCGCCGCGCCATGAAGCGTGCGGTGCAGTCGGCGATGCGTCTCGGCGCGCAGGGCATTCGTATCAACTGCTCGGGCCGTCTCGGCGGTGCTGAAATCGCCCGCATGGAATGGTACCGCGAGGGCCGCGTGCCGCTGCACACGTTGCGCGCCGACGTCGATTACGGCGTCGCCACCGCGTTCACCACGTTCGGCACCTGCGGCGTCAAGGTCTGGATCTTCAAGGGTGAAATCCTCGAGCACGATCCGATGGCTCAGGACAAGCGCATGGCTGAAGGCGACGGCGGCCGTCCGCGTCGCGATGCAGCCTGA
PROTEIN sequence
Length: 233
MGQKINPIGLRLGINRTWDSRWFAGKNEYAKLLHEDVRIREMLMKELKQAAVARIVIERPHKKCRVSVHSARPGVVIGKKGADIDKLRKKVAEITSSDVVINIIEIRKPELDATLVAESIAQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARMEWYREGRVPLHTLRADVDYGVATAFTTFGTCGVKVWIFKGEILEHDPMAQDKRMAEGDGGRPRRDAA*