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SCNpilot_expt_1000_bf_scaffold_493_10

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 4559..4972

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L16 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH75_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 137.0
  • Bit_score: 265
  • Evalue 2.20e-68
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 137.0
  • Bit_score: 265
  • Evalue 3.10e-68
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 137.0
  • Bit_score: 262
  • Evalue 5.90e-68

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGATGCAACCAAAGAAGACAAAGTTCCGCAAGGCGCATAAGGGCCGTATTCACGGCGTCGCCTCGTCGGGCGCGACGTTGTCTTTCGGCCAGTTCGGCCTGAAGGCGATGGCGCCGGAGCGCATCACGGCGCGCCAGATCGAAGCCGCGCGCCGTGCGCTGACCCGTCACATGAAGCGTGCGGGCCGCGTCTGGATCCGCGTGTTCCCCGATCTTCCGGTGTCGAAGAAGCCGGCCGAAGTCCGCATGGGCTCGGGCAAGGGTTCGCCGGAATTGTGGGTGGCGCGGGTCAAGCCCGGCCGCATCCTGTTCGAGATCGACGGCGTTACCGATCAGACGGCGCGTGAGGCGCTGACGCTCGCTGCCGCCAAGCTTCCGATCAAGACGCGCTTCGTCGCGCGCATCGCGGAGTAA
PROTEIN sequence
Length: 138
MMQPKKTKFRKAHKGRIHGVASSGATLSFGQFGLKAMAPERITARQIEAARRALTRHMKRAGRVWIRVFPDLPVSKKPAEVRMGSGKGSPELWVARVKPGRILFEIDGVTDQTAREALTLAAAKLPIKTRFVARIAE*