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SCNpilot_expt_1000_bf_scaffold_493_11

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 4978..5193

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L29 n=1 Tax=Afipia birgiae RepID=UPI0002E310FF similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 70.0
  • Bit_score: 127
  • Evalue 5.00e-27
rpmC; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 67.0
  • Bit_score: 123
  • Evalue 2.30e-26
50S ribosomal protein L29 {ECO:0000313|EMBL:AEI07022.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 67.0
  • Bit_score: 123
  • Evalue 1.00e-25

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
ATGGCCGATTTGAAGATTGACGACATCCGCGCGATGAGCCCCGACCAGATGGAGGACGCTATCCTCAATCTGAAGAAGGAGCGCTTCAATCTGCGCTTCCAGCGCGCCACCGGTCAGCTCGAGAACACCTCGCGCCTGCGCGAGGCTCGCCGCGATATCGCACGCATCAAGACTGTCGCCGCGCAGAAGCGCGCCGCCGACAGCAAGAAGAAGTAA
PROTEIN sequence
Length: 72
MADLKIDDIRAMSPDQMEDAILNLKKERFNLRFQRATGQLENTSRLREARRDIARIKTVAAQKRAADSKKK*