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SCNpilot_expt_1000_bf_scaffold_493_14

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 5956..6270

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L24 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WVT2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 104.0
  • Bit_score: 198
  • Evalue 3.30e-48
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 104.0
  • Bit_score: 198
  • Evalue 4.70e-48
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 104.0
  • Bit_score: 194
  • Evalue 1.50e-47

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Taxonomy

Nitrobacter sp. Nb-311A → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGGCTGCCAGAATCCGCAAGGGTGACAAGGTCATCGTGCTGTCGGGCCGCGACAAGGGCCGCACCGGCGAGGTGTTCGAGGTGCGCCCGAGAGAGAATCGCGCGCTGGTGCGCGGCGTCAATCTCGTGAAGCGTCACCAGAAGCAGACGCAGAACCAGGAAGGCGGCATCATCTCCAAGGAGTCGCCGATCCACCTGTCCAACATCGCGATTGTCGGCAAGGACGGCAAGCCGACCCGTGTTGGCTTCAAGATTCAGGCTGACGGCACCAAGGTGCGTGTCGCCAAGCGTTCGGGAGCTGAGATCGATGGCTGA
PROTEIN sequence
Length: 105
MAARIRKGDKVIVLSGRDKGRTGEVFEVRPRENRALVRGVNLVKRHQKQTQNQEGGIISKESPIHLSNIAIVGKDGKPTRVGFKIQADGTKVRVAKRSGAEIDG*