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SCNpilot_expt_1000_bf_scaffold_493_21

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 9153..9359

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L30 n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PKN3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 64.0
  • Bit_score: 109
  • Evalue 1.30e-21
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 64.0
  • Bit_score: 109
  • Evalue 1.90e-21
rpmD; 50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 68.0
  • Bit_score: 106
  • Evalue 4.70e-21

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGGCCAAGGAAGCCAAGAAGGCCGGCAAAACGGTCAAGATCGAGCAGGTCGGCAGCGCCATCCGCCGTCACAGCTCGCAGCGCGAGACGCTGGTCGGCCTGCGTCTCAACAAGATCGGCCGTGTTTCGGAGCTGCAGGATACGCCTGAGGTTCGCGGCATGATCTATAAAGTCAGGCACCTCGTCCGCGTCGTCGGCGAGAAGTAA
PROTEIN sequence
Length: 69
MAKEAKKAGKTVKIEQVGSAIRRHSSQRETLVGLRLNKIGRVSELQDTPEVRGMIYKVRHLVRVVGEK*