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SCNpilot_expt_1000_bf_scaffold_454_6

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 6885..8051

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia felis ATCC 53690 RepID=K8NL04_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 375.0
  • Bit_score: 547
  • Evalue 1.40e-152
  • rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKS28215.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 375.0
  • Bit_score: 547
  • Evalue 2.00e-152
acriflavine resistance protein E; K03585 membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 376.0
  • Bit_score: 520
  • Evalue 4.50e-145
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGGTTTCGGCGCTGCTTGTCGCGGCGGGCGCTGGACTGACGGGATGCGACGATCCGGCGTCGGCCGTTGCGGGCAAGACGGCCGCCACACCAGAGGTCAGCATTGTCACGGTGACACCTGCGCCTTTCGCGATCGTGCGCGAGCTGCCGGGGCGTATCGCGCCGACCCGCGTCGCCGACGTGCGGCCGCAGGTTTCCGGCATCATTGTCGAGCGCCTGTTTCATCAGGGCAGCGACGTCGAAGCGGGCGATCCGCTCTACAACATCGATTCCAAGCCGTTCGAAGTGGACCTGATGGCTCAGGAGGCGGCCTACGCGAAAGCGCAGGCGGTGCTCGACCAGGCGGTGCGTCACGCCGAGCGCATCGCCACGCTCGCGCGCCAGCATGTCGTGTCTGACGCCGAAAACGAGAAGGCGATCGCGGCGCGGCGCCAGGCCGAGGCCGATCTTGCGGCGCGCAAGGCTGATGTGGCGCGCGCGCGTCTCAATCTCGACTACGCGACCATTCGCGCGCCGATCAAGGGCCGCATCGGCGCGGCGCTGGTCAGCGAAGGCGCGCTGGTGGTGCCCAACGACACCACGAGTCTTGCCTCGATCCAGCAGCTCGATCCGATCTATGCCGACTTCACCCAGTCGGTCAGCGATCTGAACAAGATGCGCCGGGCTCTCGAGCGCGGCGATCTGGAGGAGATCGATCGCGGCGCGGCGAAAGTCCGCCTGATTGTCGATGACGGCAATTATCCGCTCACCGGCAAGCTGCTGTTCTCGGAAGCCAAGGTGAACGTGGATACCGGGCAGGTCACCCTGCGCGGCGAATTTCCGAACCCGAAGGGCGAGCTGTTGCCCGGCATGTATGTGCGGGTGCTGATCGAGCAGGGCATCGATACCGATGCCATCGCAGTGCCCCAGCAGGCGGTGCAGCGCACCACCGATGGTGGCAGCGAGGTGTTCGTGGTGCGGCCGGACAACCGCATCGTGGCGCAGCCGGTTCGCACCGGCGCGGTGCAGAACGGTAAGTGGCTGATCAACGAAGGCCTGAAGGCCGGCGACCGTGTCGTGGTCGAGGGCTTCCAGAAGTTTGTGGCCGGCGATCTGGTTTCGCCGCAGCCGATCGATGAGATCAAGACGGGATCGGTCGAGCCTGACACGCACACCTCGCGCAACTGA
PROTEIN sequence
Length: 389
MVSALLVAAGAGLTGCDDPASAVAGKTAATPEVSIVTVTPAPFAIVRELPGRIAPTRVADVRPQVSGIIVERLFHQGSDVEAGDPLYNIDSKPFEVDLMAQEAAYAKAQAVLDQAVRHAERIATLARQHVVSDAENEKAIAARRQAEADLAARKADVARARLNLDYATIRAPIKGRIGAALVSEGALVVPNDTTSLASIQQLDPIYADFTQSVSDLNKMRRALERGDLEEIDRGAAKVRLIVDDGNYPLTGKLLFSEAKVNVDTGQVTLRGEFPNPKGELLPGMYVRVLIEQGIDTDAIAVPQQAVQRTTDGGSEVFVVRPDNRIVAQPVRTGAVQNGKWLINEGLKAGDRVVVEGFQKFVAGDLVSPQPIDEIKTGSVEPDTHTSRN*