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SCNpilot_expt_1000_bf_scaffold_454_16

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 20340..21770

Top 3 Functional Annotations

Value Algorithm Source
selA; selenocysteine synthase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 473.0
  • Bit_score: 676
  • Evalue 7.80e-192
L-seryl-tRNA selenium transferase SelA {ECO:0000313|EMBL:AEI07498.1}; EC=2.9.1.1 {ECO:0000313|EMBL:AEI07498.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 473.0
  • Bit_score: 676
  • Evalue 3.50e-191
L-seryl-tRNA(Sec) selenium transferase n=2 Tax=Oligotropha carboxidovorans RepID=B6JC80_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 473.0
  • Bit_score: 676
  • Evalue 2.50e-191

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1431
ATGGGTGACGGGCGAACAATCCCCGGCCGCATTCCGTCTGTCGACGAGATTCTGAAGACCGCGGCGGCGGTTGATGCGATCGACCGTTTCGGCCGCCCGTCGGTCGTCGATGCCATTCGCCGCAGCGCGGAGGATGTGCGCGCCAGCCTTGCCAAGGCCAACGGGCACGCGGCGTCGGTGAAAAGCAGCGCCGAGTCGATCATGACGTCTGCGGTGGCGCGTCTCGAGCGCCAGGCCGAGCCGAACGCCAGGCCGGTGTTCAATCTCACCGGCACCATCCTGCACACCAATCTCGGACGCGCTATCCTCGCGGAGGCCGCGATCGAAGCCGCGACCCGTGCCATGCGCGAGGCGATGGCTCTGGAGTTCGATCTTGCCGAAGGCAGGCGCGGCGAGCGCGACGGCCTGGTCCGCGATCTGCTCTGCGAGCTTACCGGCGCTGAAGATGCGACCGTGGTCAACAATAACGCCGCCGCCGTTCTGCTCGCGCTCAATACTTTCGGTCGGGCCAGGGACGTGATCATTTCGCGCGGCGAACTGATCGAGATCGGCGGCTCGTTCCGGATGCCGGAGATCATGGCGCGCGCCGGCACGAGATTGGTCGAGGTCGGCACCACCAACCGTACGCATGAGAAGGATTACGCCGCTGCGATCGGTCCGAAAACCGGCCTGATCCTCAAGGTCCACACCTCGAACTACCGGATCGAGGGATTCTCCAAATCGGTGTCCGGCAAGGCGCTGGCCGAGCTTGCTCATGCCAGGCAGGTGCCGCTGATCAATGATCTTGGCTCCGGCACGTTGGTCGATCTCGCGCGCTACGGCCTCGTCCATGAGCAGACGGTGGCCGAGGCGGTGGCGGAGGGCGCCGATCTTGTCACCTTCTCCGGCGACAAGCTGCTTGGCGGCCCGCAGGCCGGTTTCATCGTCGGCCGCAAGGAGTTGATCGCGAAGCTCAACAAGAATCCGATGAAGCGCGCCTTGCGGATGGACAAGATCCGGCTCGCCGCCGTCGAGGCGACGCTGCGGCTGTATCGCGATCCGGATCGTCTGGCCGAGCGGTTGCCGACCCTGCGGATGATGGCGCGCCCGCGACAGGATATCGAAACGCAGGCCGCCCGTATTCTTCCGGCGATCACGGCGGCCGTGGCGCCGCGTTACAGCGCGAGCGTGACGCCATGTGCAAGCCAGATCGGCTCCGGCGCGCTGCCGCTGGAAACGATTCCGAGCGCCGGCATCGCCATCGGCTTTGCCGGTCCGCGCGGCCGCGGCCGCGCGCTTGCCGAACTGGTCACGGCATTCCGGCAGCTTCCAATGCCGGTGATTGGTCGGATTGAGGACGATACGTTCGTGCTGGATCTGCGCTGCCTCGAGGATGAGGCGGGGTTCGTTCGCAATCTGGCGCAACTGAGGCGGGGAGGGGATTCGCAATGA
PROTEIN sequence
Length: 477
MGDGRTIPGRIPSVDEILKTAAAVDAIDRFGRPSVVDAIRRSAEDVRASLAKANGHAASVKSSAESIMTSAVARLERQAEPNARPVFNLTGTILHTNLGRAILAEAAIEAATRAMREAMALEFDLAEGRRGERDGLVRDLLCELTGAEDATVVNNNAAAVLLALNTFGRARDVIISRGELIEIGGSFRMPEIMARAGTRLVEVGTTNRTHEKDYAAAIGPKTGLILKVHTSNYRIEGFSKSVSGKALAELAHARQVPLINDLGSGTLVDLARYGLVHEQTVAEAVAEGADLVTFSGDKLLGGPQAGFIVGRKELIAKLNKNPMKRALRMDKIRLAAVEATLRLYRDPDRLAERLPTLRMMARPRQDIETQAARILPAITAAVAPRYSASVTPCASQIGSGALPLETIPSAGIAIGFAGPRGRGRALAELVTAFRQLPMPVIGRIEDDTFVLDLRCLEDEAGFVRNLAQLRRGGDSQ*