ggKbase home page

SCNpilot_expt_1000_bf_scaffold_715_20

Organism: SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27

near complete RP 51 / 55 BSCG 51 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: comp(16850..18253)

Top 3 Functional Annotations

Value Algorithm Source
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 477.0
  • Bit_score: 784
  • Evalue 2.60e-224
  • rbh
ATP-dependent RNA helicase RhlE {ECO:0000256|HAMAP-Rule:MF_00968}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00968};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 477.0
  • Bit_score: 784
  • Evalue 1.20e-223
RNA helicase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037397DB similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 484.0
  • Bit_score: 806
  • Evalue 1.60e-230
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGACTGTTGAAACCACCTTTGCCAGCCTTGCGCTGGCCGAACCCATTCTGCGTGCCATCGCCGACGCCGGCTACACCACGCCCACGCCGATCCAGGCGCAGGCCATCCCGCAGGTGCTGGCGGGCGGCGACCTGCTCGCCGCGGCGCAAACAGGAACGGGGAAAACCGCCGGCTTCACCCTGCCGATCCTGCATCACCTCTCGACCAAGGCCGCTCAGGCCAAGCCGGGCCGTCCGCGCTGCCTGATCCTGGTGCCGACACGCGAGCTCGCCGCGCAGGTCGAGGAATCGGTGAAAACCTATGGCAAGTATCTGCCGCTCACCTCGATGGTGATGTTCGGCGGGGTCAACATCAACCCGCAGTTCAAGGCGCTGAAGTCGCGCGTCGACATCCTCGTCGCCACGCCGGGGCGGCTGCTCGACCACCTCGGCCAGAAGACCGTCGATCTCTCGGGCGTCGAGATCCTGGTGCTCGACGAGGCCGACCGCATGCTCGACATGGGCTTCATCCGCGACATCAGGAAGGTGCTCGCGGCGCTGCCGAAGCAGCGCCAGAACCTGTTGTTCTCGGCGACCTTCTCCGACGAGATCCGTGCGCTCGCCAACGGCCTCCTGCACAACCCGAAGAGCGTCGAAGTCGCGCGCCGCAATACCACGGTGGACGTCGTCGAGCAGTCGCTGCACCGCGTGCCGCAGGCGCACAAGCGTGATCTGTTGGCGCATCTCATCAAGCACCACGACTGGCAACAGGTGCTGGTCTTCACCCGCACCAAGCACGGTGCCAACAAGCTTGCGGAGAAGCTCATCAAGGACGGCATCACCGCCGCCGCGATCCACGGCAACAAGAGCCAGGGCGCGCGCACGAAGGCGCTGGCGAGCTTCAAGGACGGCAGCGTGCGCGTGCTGGTGGCGACCGACATCGCCGCGCGCGGCATCGACATCGACCAGCTGCCGCAGGTGGTCAACTTCGAACTGCCCAACGTGCCCGAGGACTACGTGCACCGCATCGGCCGTACCGGTCGCGCCGGCGCGACGGGCGCGGCGCTGTCGCTGGTCGACGACGAGGAAATGGGCTACCTGCGCGACATCGAGAAACTGATCAAGTGCAGCATCGTGCGCGTCGAGATCGAGCCGGGCTTCGTGCCGCCGGCACGCGTCGAGCTCATGTCGGATGCGCGTCCGCCGCGGCCCGCGCAGGGCCGACCGGCGCCACGAGCAGGGCAGGGCGGTCGCCCAGGTCAGCCTGGCGGCCGCGCGCCGCAGGGCAAAGCGCCGTCCGGCCAGGCCCGTGCGGGCGCTGCCAAGCCCGCGCCCAAGCCCGGCCCGCAGCCGGCATCGCATGCGCGCAAGCCGCGTCCGCAGGCGGCGCTATTCTCGGCCAAGCCCGCCACGCGCGGGCACTGA
PROTEIN sequence
Length: 468
MTVETTFASLALAEPILRAIADAGYTTPTPIQAQAIPQVLAGGDLLAAAQTGTGKTAGFTLPILHHLSTKAAQAKPGRPRCLILVPTRELAAQVEESVKTYGKYLPLTSMVMFGGVNINPQFKALKSRVDILVATPGRLLDHLGQKTVDLSGVEILVLDEADRMLDMGFIRDIRKVLAALPKQRQNLLFSATFSDEIRALANGLLHNPKSVEVARRNTTVDVVEQSLHRVPQAHKRDLLAHLIKHHDWQQVLVFTRTKHGANKLAEKLIKDGITAAAIHGNKSQGARTKALASFKDGSVRVLVATDIAARGIDIDQLPQVVNFELPNVPEDYVHRIGRTGRAGATGAALSLVDDEEMGYLRDIEKLIKCSIVRVEIEPGFVPPARVELMSDARPPRPAQGRPAPRAGQGGRPGQPGGRAPQGKAPSGQARAGAAKPAPKPGPQPASHARKPRPQAALFSAKPATRGH*