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SCNpilot_expt_1000_bf_scaffold_779_14

Organism: SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27

near complete RP 51 / 55 BSCG 51 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: 11688..13400

Top 3 Functional Annotations

Value Algorithm Source
type IV pilus assembly protein, PilB; K02652 type IV pilus assembly protein PilB id=12493282 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 572.0
  • Bit_score: 1040
  • Evalue 0.0
type IV pilus assembly protein, PilB; K02652 type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 571.0
  • Bit_score: 1024
  • Evalue 1.80e-296
Type IV pilus assembly protein, PilB {ECO:0000313|EMBL:AAZ98323.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 571.0
  • Bit_score: 1024
  • Evalue 8.10e-296

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1713
ATGGCGGCAGTGACGAACATCAATTTGACGGGCCTGGCGCGTGCCATGGTCAACCGGGGCTGGCTTTCCGAGGATGACGCGGAAGGCGTGTGGAAGCGCGCCACGCAGGCGGGCGACTCATTTGTGACCGAGCTGTTGCGCGGACGGCGCTTCAAGGCCGACCAGATCGCGGAATTCGCGGCAAGCTCGTTCGGTTTCCCCTATCTGGATCTCGCGGCGATGGACCCGGAGAGCCTGCCGCAGGGACTGCTCGATGGCAAGCTGGTGCTGAAGCGGCGCGTCATCGCGCTGTTCCAGCGCGGCGGTAAGCTGTACGTGGGCACCTCCGACCCCACGCACCTGCAGGCGCTGGATGAGGTCAAGTTCCAGACCGGACAGGCAGTCGAGCCGGTCGTCGTCGAGGACGACAAGCTCGGCAAGCTGATCGAGAAAGTGGGCGAGGCGGCCGACAACACCCTCGCAGTGCTGAATGCGGAAGACCTCAATCTCGACTTCACGGACGAGGAATCCGCGGCGGCGCAGCCGGATACCGGCGGCATCGAGATCGACGACGCGCCGGTGGTGCGCTATCTGCAGAAGATCATGCTGGATGCGATCAACCAGGGCGCGTCCGACATCCATTTCGAGCCGTACGAGAAGTATTACCGCATCCGCTACCGCCGCGACGGCATTCTGTCCGAAGTGGCGCAGCCGCCGATGGCGATCAAGGACAAGGTGGCGTCGCGCATCAAGGTGCTGTCGCGTCTGGACATTTCGGAAAAGCGCGTGCCGCAGGACGGACGCATGAAGCTGGTGCTGTCGAAGAGCCGGGCCATCGACTTCCGGGTCAGCACCCTGCCCACGCTGTATGGCGAGAAGATCGTCATGCGTATTCTCGATCCCACCAGTGCCCAGCTGGGCATCGAGGCGCTGGGCTACGAGCCGTGGCAGAAGGAGCTGCTGATGAATGCGGTGCAGCGGCCCTATGGCATGGTGCTGGTGACGGGGCCGACCGGTTCCGGCAAGACGGTGTCGCTCTACACCTGCCTCAACATCCTCAACAAGCCCGACGTCAACATTTCGACGGCGGAAGACCCGGCGGAAATCCAGTTGCCCGGCATCAACCAGGTCAACGTCAACGACAAGGCGGGACTGACGTTCTCGGCCGCGCTGAAGTCCTTCCTGCGCCAGGATCCCGACGTCATCATGGTCGGCGAGATCCGCGACCTGGAGACGGCCGATATCGCCATCAAGGCGGCACAGACCGGCCACATGGTGATGTCCACGCTGCACACCAACGATGCGCCGGGCACGCTCACCCGCCTCTTGAACATGGGCGTCGCGCCGTTCAACGTCGCCTCCTCGGTCATTCTCATCACCGCGCAGCGCCTCGGCCGCCGGCTGTGTTCCTGCAAGCAGCCGGCCGACATCCCCGACGAGACGCTGCTGGCGGCGGGCTTCACCGCGGACCAGCTCGACGGCAGCTGGAAACCGTACAAGGCGGTCGGCTGCGACATCTGCAATGGCACCGGCTACAAGGGCCGGGTGGGTATCTACCAGGTCATGCCGATCACCGATGCGATGACACGCATCATCCTCAAGGGTGGCAACGAGGCGGATATCGCCGACCAGGCGCGGCGTGAAGGCGTGCTCGATCTGCGCCAGGCCGGCCTGTTGAAAGTGAAAGCCGGCCTCACCTCGCTGGAAGAGGTCGAGGCCGTCACCAACATGTAA
PROTEIN sequence
Length: 571
MAAVTNINLTGLARAMVNRGWLSEDDAEGVWKRATQAGDSFVTELLRGRRFKADQIAEFAASSFGFPYLDLAAMDPESLPQGLLDGKLVLKRRVIALFQRGGKLYVGTSDPTHLQALDEVKFQTGQAVEPVVVEDDKLGKLIEKVGEAADNTLAVLNAEDLNLDFTDEESAAAQPDTGGIEIDDAPVVRYLQKIMLDAINQGASDIHFEPYEKYYRIRYRRDGILSEVAQPPMAIKDKVASRIKVLSRLDISEKRVPQDGRMKLVLSKSRAIDFRVSTLPTLYGEKIVMRILDPTSAQLGIEALGYEPWQKELLMNAVQRPYGMVLVTGPTGSGKTVSLYTCLNILNKPDVNISTAEDPAEIQLPGINQVNVNDKAGLTFSAALKSFLRQDPDVIMVGEIRDLETADIAIKAAQTGHMVMSTLHTNDAPGTLTRLLNMGVAPFNVASSVILITAQRLGRRLCSCKQPADIPDETLLAAGFTADQLDGSWKPYKAVGCDICNGTGYKGRVGIYQVMPITDAMTRIILKGGNEADIADQARREGVLDLRQAGLLKVKAGLTSLEEVEAVTNM*