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SCNpilot_expt_1000_bf_scaffold_377_30

Organism: SCNPILOT_CONT_300_BF_Burkholderiales_67_33

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 29322..31073

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 572.0
  • Bit_score: 785
  • Evalue 6.50e-224
msbA1; lipid A exporting ATP-binding/permease ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 580.0
  • Bit_score: 778
  • Evalue 1.80e-222
  • rbh
ATP-binding protein n=1 Tax=Bordetella holmesii RepID=UPI00036807AB similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 580.0
  • Bit_score: 782
  • Evalue 3.00e-223
  • rbh

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Taxonomy

Bordetella hinzii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1752
GTGAACTCCCAACCCGTCAAATCCGAACTGTGGCGCCGCGTCTATAGCCGTGTCCTGAAATACTGGAAGGCACTGGCCCTCGGCATGCTGTTCCTGGTCGGCGTGGCCGCGTCCCAGCCATTGTTGGCCATATTGATGAAGCCGCTGCTCGACGGCGGCTTCAACGGCCAGAATCCGGACTATGTGTGGAAGATCCCGCTTGCCATCGTCGGCATCTTCCTCGTGCGCGGCGTGCTCAATTTCCTGAGCGACTATCTCATGGCCTGGTCGGCCAACCACGTGCTGGCCGACCTGCGGCGCGAGATGTTCGACCGCCTGCTGCGCCTGCCCGACGGCTATTTCAAGCGCATGGGCTCGTCGGTCCTGCTGAACCGTTTCGTGGTCGACGCCTCCAACGTCATGCAACTGGCCACCGAGGTCATCACGGTGCTGGTGCGCGAGACCATGATCGTGATCTCGCTGGCCTGCGTGCTGTTCTACCTGTCGTGGAAGCTGACGTTGATCGCGCTGGTGGCCTTCCCGCTGTCCACCTTCATCATGCGTGCCATCGCGCGCCGCATCCGCCGCATCAACCGCGAGACCATCACCATGAACGGCGAGCTGACCCGGGTGGTGAGCGAGGCCATCGATGGGCAGCGGGTCATCAAGCTGTTCAGCGGCTATGCCCACGAGGAAGAGCGCTTCCTGCACATCAACGGCCGGCTGCGGCGCTTCGCGATGCGCAACACGGTGGCCGGCGCGGCCTCGGCGCCCATCACGCAGGCCATCGCCGCCGTGGCGCTGGCGGTCGTGGTGTCGACCGCGCTCGGGCAGTCGGGCGCCAACCAGATCACCGTGGGCGGTTTTGCCGCCTTCGTGACCGCCATGCTGCAGATGCTGGATCCGCTCAAGCGACTGGCCAACGTCGCCAGTCCCATGCAGCGCATGCTGGTATCCGCGGAAAGCGTGTTCGCGCTGGTGGACGAGGAACCCGAAAGCGATAACGGCGTGCGCCTGCTGCCCAGGCCGGCGCGGGGGCATATCGAGTTCGAACAGGTGTCCCATCGCTTTCCCGACGCCGGCCGCGACACCCTGGAGCAGATCTCGTTCACGGTGGAGCCGGGTCAGACGGTGGCTTTCATCGGACGATCCGGTAGCGGCAAGACCACACTGGTCTCCATGCTGCCCCGTTTTGCGCTGCCTACGGCGGGATCGATCCGGGTGGATGGCATTCCCATCGACGAATTGACGCTGACCAGCCTGCGCGACGCCATTTCGCTCGTGAGCCAGGATGTGGTGCTGTTCGATGACACCATTGCCGCCAATGTGAGCTACGGCGCGAATGCCGAGCCGTCGGAAGCGGCCATTCGCCAGGCCTTGGCCGACGCGAACCTGCTGGAATTCGTCGATTCGCTGCCGCAGGGCATGCACAGCCAGGTGGGCGAGAACGCCGCCCGGCTGTCAGGTGGCCAGCGGCAGCGCCTGGCCATTGCGCGGGCGCTGATCAAGGACGCGCCCATCCTGATTCTGGACGAGGCCACTTCGGCCCTGGACAACGAGTCCGAACGCCAGGTCCAGGCGTCGCTGGAGCGCTTGATGGCGGGACGCACGACGCTGGTCATCGCCCACAGGTTGACCACGGTGCAGAATGCCGACCGCATCATCGTGCTGGACCAGGGGCGTATCGTCGAACAGGGCTCCCATGCCGACCTGCTGGCGGCGGAAGGCCTGTACGCGACGCTTTACAAGATGCAATTCAGCGAAGCGGCGTGA
PROTEIN sequence
Length: 584
VNSQPVKSELWRRVYSRVLKYWKALALGMLFLVGVAASQPLLAILMKPLLDGGFNGQNPDYVWKIPLAIVGIFLVRGVLNFLSDYLMAWSANHVLADLRREMFDRLLRLPDGYFKRMGSSVLLNRFVVDASNVMQLATEVITVLVRETMIVISLACVLFYLSWKLTLIALVAFPLSTFIMRAIARRIRRINRETITMNGELTRVVSEAIDGQRVIKLFSGYAHEEERFLHINGRLRRFAMRNTVAGAASAPITQAIAAVALAVVVSTALGQSGANQITVGGFAAFVTAMLQMLDPLKRLANVASPMQRMLVSAESVFALVDEEPESDNGVRLLPRPARGHIEFEQVSHRFPDAGRDTLEQISFTVEPGQTVAFIGRSGSGKTTLVSMLPRFALPTAGSIRVDGIPIDELTLTSLRDAISLVSQDVVLFDDTIAANVSYGANAEPSEAAIRQALADANLLEFVDSLPQGMHSQVGENAARLSGGQRQRLAIARALIKDAPILILDEATSALDNESERQVQASLERLMAGRTTLVIAHRLTTVQNADRIIVLDQGRIVEQGSHADLLAAEGLYATLYKMQFSEAA*