ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1679_8

Organism: SCNPILOT_EXPT_1000_BF_Rhodospirillales_43_39

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 12373..12831

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JJT0_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 152.0
  • Bit_score: 246
  • Evalue 1.60e-62
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 152.0
  • Bit_score: 246
  • Evalue 2.20e-62
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 152.0
  • Bit_score: 238
  • Evalue 1.30e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oceanibaculum indicum → Oceanibaculum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGAAAACATTTTCTATAAAACCTGCCGATGTGCAGAAAAAATGGTACGTTATTAACGCTGAAGGCCTGGTTCTGGGGCGGTTAGCATCTTTCATTGCAAAGAGGCTGCGTGGCAAGCACTTGCCAACTTTCACCCCTCATGTGGACTGTGGTGACAATATTATTGTCATCAACGCTGATAAAATTGTTCTCACGGGTAATAAGCTGGACGATAAAAAGTTCTACTGGCATACAGGTCATCCAGGTGGCATCAAAGAGAGGACCGTCTCGCAAATCATTAATGGTCGCTTCCCTGAAAGGGTTATCACCAAAGCTGTTGAGCGGATGATTAGCCGAGGCCCACTCGCCCGCAAGATTATGACCAATCTAAAAGTCTATAAAGGTACAGAGCATCCTCATGCTGCTCAAAGCCCAGAGCTTTTAGATTTCGCTTCCATGAATACAAAAAATAAGAGGTAA
PROTEIN sequence
Length: 153
MKTFSIKPADVQKKWYVINAEGLVLGRLASFIAKRLRGKHLPTFTPHVDCGDNIIVINADKIVLTGNKLDDKKFYWHTGHPGGIKERTVSQIINGRFPERVITKAVERMISRGPLARKIMTNLKVYKGTEHPHAAQSPELLDFASMNTKNKR*