ggKbase home page

SCNpilot_expt_1000_bf_scaffold_17943_6

Organism: SCNPILOT_EXPT_1000_BF_Rhodospirillales_43_39

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(4088..4648)

Top 3 Functional Annotations

Value Algorithm Source
Transposase n=1 Tax=uncultured Nitrospirae bacterium MY4-5C RepID=D9MP93_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 123.0
  • Bit_score: 90
  • Evalue 2.30e-15
Transposase {ECO:0000313|EMBL:ADI87782.1}; TaxID=798580 species="Bacteria; Nitrospirae; environmental samples.;" source="uncultured Nitrospirae bacterium MY4-5C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 123.0
  • Bit_score: 90
  • Evalue 3.20e-15
Insertion element protein similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 126.0
  • Bit_score: 84
  • Evalue 3.90e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured Nitrospirae bacterium MY4-5C → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 561
TTGTACATATCTTCAAAGTTATTTTTTACTTCCCCACCGCCTTCAAGGGCAAAAACTCCTAGCTCACCAGCCCCGCCCGACAATCTAGCCATTGATCAAGCATCTCAAGCATCAGAGCTGCCCATTAGCCAACAGTTCCTCGAACTCACCCAAGAATACCAACAGCAGGGCACGCTTTCTGAAGAGCGCTACCAGCAGCTGGAAAAACTTTGGATCTGGAAAGTGCTGGATCATGACACCCGAAAGCTGTGTGCCTGGGAGTTTGGTCATCGTGATATCCNNNNNNNNNNNNNNNNNAAAAAACTCTATACAGATTGCTTCCCGGCTTATGGGGAAATTTCTGGCGCTATTCCTCTGGTTCAAAGCAAAAAACACGTATTTCAGAGCGAGCAGAATAACGCGCAACAGCGACGGTGGTTGGCAAGTTTCCATCGCAGATCCCAAGTGGTGACAAGCTCCACCGTTATGTTAGAAGCAAGACTTCGTCTCTTTGCTCTCTTTCGTGTCAACGGATCCATCCAAGAACTCTCCTCTTCCTCAGAAATTCAATGCCTATGCTAA
PROTEIN sequence
Length: 187
LYISSKLFFTSPPPSRAKTPSSPAPPDNLAIDQASQASELPISQQFLELTQEYQQQGTLSEERYQQLEKLWIWKVLDHDTRKLCAWEFGHRDIXXXXXXKKLYTDCFPAYGEISGAIPLVQSKKHVFQSEQNNAQQRRWLASFHRRSQVVTSSTVMLEARLRLFALFRVNGSIQELSSSSEIQCLC*