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SCNpilot_expt_1000_bf_scaffold_4268_5

Organism: SCNPILOT_EXPT_300_BF_Burkholderiales_66_26

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(1380..2567)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator id=12555725 bin=CNBR_ACIDO species=Bradyrhizobium sp. WSM1253 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 385.0
  • Bit_score: 535
  • Evalue 5.70e-149
  • rbh
Putative Zn peptidase {ECO:0000313|EMBL:EIG58040.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 390.0
  • Bit_score: 527
  • Evalue 1.30e-146
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 386.0
  • Bit_score: 478
  • Evalue 2.60e-132
  • rbh

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Taxonomy

Bradyrhizobium sp. WSM1253 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGACCGAATCCCCGCTAAGCGCGATGTCACCTACCGAAGTGGGCGAGCGCCTGCGCCTTGCCCGCGAAGCCGTCCGCATGACGCAAAAGCAAGCCGCTGATGCCATATCGGTTGCGCGCACGACGTTGGTCGCCATCGAGCAAGGCCAGCGCCGTGTGCGGATCGATGAACTGCAGCAGCTCGCCAAGACGTATGGCGTGTCCGTCAACGCCATCCTGCGTCGCGAGGCTGTGCATGTCGATCTGGTGCCCCGCTTCCGTAAATTTTTCGACGCCAAAGACTTTGCCGCCGCTGCGGCGACCGAATTACTTGCCAACCTGGCGCGAGCCGAAGTGGAACTGGAGAACGTACTGGGCGTAAAGCGCGCCCGCAATTACCCGCCGGAGCGGCCGATCCTTTCCGGTGACGTGCGGGTGCAAGCCGAACAGGATGCACTGGAGCTACGACAACGTCTGGGCCTGGGCTTCGCCCCCATCGCCGACATCGTCACTCTGCTGGAGATGGAGCTTGGCATACGGGTGTATGTCCGGCGCTTCGAAGGATCGGTCTCAGGCGTTTTCGTCTACGATGAGACGCTCGGTGCATGCATTCTGCTCAACGCCAATCATCCGCGCGAACGCCGCAACCAGACGGGCGGTCACGAGCTGGGGCATTTCATTTCGGTGCGGCACGAGCCCGAAGTTCTGCATGCGAATGAGCCGGAGAACTCCCGAGAAGAGCGTTACGCCAATGCCTTCGGCCGCTCCTTCCTGACGCCTGCAGGGGGCGTGCGCCAGAAGTTTCAGGACGTCACGGCAGGATCGACGCATCTGACGCGCCGCCACATCATCGTGCTGGCGCACTTCTTCGGCGTGTCACGCGAGGCGATGGTCCGGCGGCTGGAGGAATTGGGCCTGACCAGGAAGGGCACGTGGGATTGGTTCGCGGCAAACGGCGGCATCACCGACGAGCAAGCGCAACAGGTGCTGGGCGATCTGCGCACGGCCGACCACCAGAAGGTGGAGGCCGACAAGCCGACGACGCTGAGACTCAATCTGCTGGCCGCCGAAGCCTATAGGCGCACGTTGCTGAGCGAAGGGCAGCTTGCGCGGCTTCTCCATCTTGATCGCATCGAGCTTCGCGAGATGCTGCAAGACATCGAGTTACAGGAGGATGAGGCGGATGACGCTCCCACTCTCCTTGCCTGA
PROTEIN sequence
Length: 396
MTESPLSAMSPTEVGERLRLAREAVRMTQKQAADAISVARTTLVAIEQGQRRVRIDELQQLAKTYGVSVNAILRREAVHVDLVPRFRKFFDAKDFAAAAATELLANLARAEVELENVLGVKRARNYPPERPILSGDVRVQAEQDALELRQRLGLGFAPIADIVTLLEMELGIRVYVRRFEGSVSGVFVYDETLGACILLNANHPRERRNQTGGHELGHFISVRHEPEVLHANEPENSREERYANAFGRSFLTPAGGVRQKFQDVTAGSTHLTRRHIIVLAHFFGVSREAMVRRLEELGLTRKGTWDWFAANGGITDEQAQQVLGDLRTADHQKVEADKPTTLRLNLLAAEAYRRTLLSEGQLARLLHLDRIELREMLQDIELQEDEADDAPTLLA*