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SCNpilot_expt_1000_bf_scaffold_1368_12

Organism: SCNPILOT_EXPT_750_P_Thiobacillus_65_1100

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(11126..12661)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 496.0
  • Bit_score: 826
  • Evalue 3.80e-237
  • rbh
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 496.0
  • Bit_score: 826
  • Evalue 1.70e-236
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Thiobacillus denitrificans RepID=UPI00038106F8 similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 511.0
  • Bit_score: 949
  • Evalue 1.20e-273
  • rbh

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1536
ATGGCAGGAACCCTCAAGGACACGGGCCGCACAAAGGGCGCAGGCGCCAAGCCCGCCCCGGCTTCGCCCGCGTCCCGGGCAATCCGGGAATCGGTGCCGCACATCCTGGAACGGCTCGGCATCGCGGCCGACGCGCTCGTCAACGACAGCCGCAAGGCCGTGCCAGGCACGGTGTTCGCCGCCTATCCAGGCGAAACCCGCGATGGCCGCGACTTCATTGCGCAGGCGGTGGCGCAGCGCGTCGATGGCGTGCTGTGGGAGGCCGACCACTACCAGTGGGACCCCGCGCTCGCCATCCCCAATGCGGGCGTGCCCAACCTGAAGACCCGTATCGGCGAAATCGCCGCCCACATCTATGGCGAGCCTTCACGCGCACTGCATATGGTCGGCGTCACCGGCACCAACGGCAAAACCTCGGTGGCGCACTGGGTGGCGCAGGCATTGTCGCAGTTGGGGCGGAAAACCGCCGTCATCGGCACCGTCGGCAATGGCTTTCCCCCTGTCGGAGACCAGCCCGGCGCGCTCACGCCGGCGCTCAACACCACGCCCGACGCCGTCGAATTGCAGCAGCGCCTTGCGCTCTACCGGCAGCAAGGCGCGGCGGGGTGCGCGATGGAGGTGTCGTCGCACGGCCTCGCGCAAGGGCGGATCAATGGCACCCGCTTCAACGTTGCGGTGCTGACCAACCTGTCGCGCGACCATCTCGACTACCACGGCGACATGGGCAGCTATGCCGATGCCAAGGCGCGCCTGTTCAACTGGCCGGGACTGCAGTGGGCCGTATTGAATGTCGACGATGCCTTCGGCCGGCAGCTGGAAAGCGAAACGCGGCCGTCGCGCGTCGCCGGCTACGGATTCCAGCGCGGTGCCGTGGTGGGAGAAAAGCTGCGCCTGTCGCAAAGCGGCCTGCATCTGCGCGTGCACACCGACTGGGGCGATGCCGAACTCGACGTGCCGCTGCTGGGCCGCTTCAACGCCGCCAACCTGCTGGCCGCGCTCGCCGCCCTGCTGGTGTCGGAGGTGAAGCTGGACGACGCCTGCCGGGCGCTGGCGCACATCGCGCCGCCGCCGGGGCGGATGCAGGCGTTCGGCGGCAACGCGCATCCGCTGGTGGTGGTGGATTACGCCCACACCCCCGATGCGCTGGAAAAGGTGCTGGCCACCCTGCGCGAAATCGTCGGCGGCGGCCGCGTCATCTGCGTCTTCGGCTGCGGCGGCAACCGCGACAAGGGCAAGCGTCCATTGATGGGGCAGGCGGCCACCCACGGCGCGGACGAGGTCTGGGTCACCAGCGACAACCCGCGCAACGAAGATCCACGCCACATCATCGACGACATCCTCGCCGGCACGAGCGGCAAGCCGCACGTCGAGGCGGATCGCGCGCGCGCCATCTTCGAGGCTATCGGCGGTGCGCATCAGGGCGACGTGGTGCTGATCGCCGGCAAGGGCCACGAGGACTACCAGGAAACGGGCGGCGAACGGCTGCCGTTCTCCGATGTCGCGGTGGCGAAGAAGGCGCTGGAGGCATGGACATGA
PROTEIN sequence
Length: 512
MAGTLKDTGRTKGAGAKPAPASPASRAIRESVPHILERLGIAADALVNDSRKAVPGTVFAAYPGETRDGRDFIAQAVAQRVDGVLWEADHYQWDPALAIPNAGVPNLKTRIGEIAAHIYGEPSRALHMVGVTGTNGKTSVAHWVAQALSQLGRKTAVIGTVGNGFPPVGDQPGALTPALNTTPDAVELQQRLALYRQQGAAGCAMEVSSHGLAQGRINGTRFNVAVLTNLSRDHLDYHGDMGSYADAKARLFNWPGLQWAVLNVDDAFGRQLESETRPSRVAGYGFQRGAVVGEKLRLSQSGLHLRVHTDWGDAELDVPLLGRFNAANLLAALAALLVSEVKLDDACRALAHIAPPPGRMQAFGGNAHPLVVVDYAHTPDALEKVLATLREIVGGGRVICVFGCGGNRDKGKRPLMGQAATHGADEVWVTSDNPRNEDPRHIIDDILAGTSGKPHVEADRARAIFEAIGGAHQGDVVLIAGKGHEDYQETGGERLPFSDVAVAKKALEAWT*