ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4753_2

Organism: SCNPILOT_EXPT_750_P_Thiobacillus_65_1100

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(638..1762)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000377A54E similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 374.0
  • Bit_score: 695
  • Evalue 3.10e-197
  • rbh
Membrane protein {ECO:0000313|EMBL:GAO36231.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 374.0
  • Bit_score: 659
  • Evalue 2.00e-186
ABC transporter membrane protein similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 374.0
  • Bit_score: 657
  • Evalue 2.90e-186
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfuricella sp. T08 → Sulfuricella → Sulfuricellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGAAGCCGCGCAGCTTCTCGTGGATCCGGCTGTGGGCGCTGGTGAAAAAGGAGTTCATCCACATCGTCCGCGACCCGCGCTCGCTGGCGATGGCCTTCCTGATGCCGCTGATCCTGCTGATCCTGTTCGGCTATGCCATCACCATGGACATCAAGACGCTCAAGCTCGCCGTCTACGACCAGGACAAGAGCGCCGCCAGCCGTCATTATGCGGAAGGGTTTCCGGCCTCCGGCTACTTCAGCGTGGTCGCAACGGCGGAAAACTATGCCGGCGTGCGCGCCCTGCTCGATGAGGGCCGCGCCCACCTGGCGCTGGTGATCCCGCCGCATTTCGCGCGCGACCTGGAGCAGGGGCGCAGCGCCCGGGTGCAGGTGCTGGCCGACGGCTCGGACGCCAACACCGCGACCATCGCGCTGGGCTATGCCGAGGCGGTCACCGGCCGCTTCAGCGCGGCACAGCAGGACAGCAAGGTCGAGCTCGCGGTGGATAACCGCCTGCGCGTCTGGTACAACCCCGAGCTGAAAAGCCGCTGGTTCATCATCCCCGGCCTGATTGCGGTGATCATGACGGTGATCACCGCGCTCTTGACCTCGCTCACCGTCTCGCGCGAATGGGAGAGCGGCACCATGGAGCAGCTGATCGCCACGCCGGTACGGCCGATCGAGCTGTTCCTCGGCAAGATGGCGCCGTATTTCGTGATCGGCGTTCTGGACGTGCTGTTCTCGGTGGCGATGGGGGTATGGGTTTTCGACGTGCCGCTCAGGGGCAGCTTCCTGTTCCTGCTCGGCGTCACCGCGATGTTCCTGGTGGGGGGGCTGAGCCTCGGCATCATGGTCTCCACCATCGCCAAGTCGCAGCTGGTGGCGAGCCAGCTGGCGATGGTGGTCACCTTCCTGCCGGCCTTTCTGCTTTCCGGGTTTCTCTATTCCATCGACAACATGCCGCGCTTCCTGCAGGCGGTGACCCACGTGGTGCAGGCGCGCTATTTCGTCGAGGTGCTGAAGAACATTTTTCTCAAGGCCAGCCCACCAGCTTTCGTGGCGGGCGACCTGGTCTTCCTGGGGCTGTTCGCGGTGGCGGTGTTCGCCGTCGCCCTCGGCAAGTTCCGCAAGAGACTGGCCTGA
PROTEIN sequence
Length: 375
MKPRSFSWIRLWALVKKEFIHIVRDPRSLAMAFLMPLILLILFGYAITMDIKTLKLAVYDQDKSAASRHYAEGFPASGYFSVVATAENYAGVRALLDEGRAHLALVIPPHFARDLEQGRSARVQVLADGSDANTATIALGYAEAVTGRFSAAQQDSKVELAVDNRLRVWYNPELKSRWFIIPGLIAVIMTVITALLTSLTVSREWESGTMEQLIATPVRPIELFLGKMAPYFVIGVLDVLFSVAMGVWVFDVPLRGSFLFLLGVTAMFLVGGLSLGIMVSTIAKSQLVASQLAMVVTFLPAFLLSGFLYSIDNMPRFLQAVTHVVQARYFVEVLKNIFLKASPPAFVAGDLVFLGLFAVAVFAVALGKFRKRLA*