ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6585_4

Organism: SCNPILOT_EXPT_750_P_Thiobacillus_65_1100

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 3820..4134

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI0003723101 similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 104.0
  • Bit_score: 200
  • Evalue 6.70e-49
ihfA; integration host factor subunit alpha; K04764 integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 96.1
  • Coverage: 102.0
  • Bit_score: 197
  • Evalue 1.80e-48
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 105.0
  • Bit_score: 200
  • Evalue 1.60e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGACCACCCTGACAAAAGCTGATCTGGCCGAACTGCTGTTCGAAAAAGTGGGTTTGAATAAACGCGAAGCCAAGGATGTCGTCGAGTCATTTTTCGATGAAATCCGCTTGTCGCTCGAAAAAGGCGACATCGTCAAACTATCCGGTTTCGGCAATTTCCAGTGCCGGGAAAAACCGCAGCGTCCAGGCCGCAACCCCAAGACCGGCGAAGAAATGCCGATTTCCGCGCGCCGCGTGGTGACCTTCCACGCCAGCCAGAAACTTAAATCCCAGGTCGAAGGCGCCCAAATTGGAACGCCCACCAGCCCGGAGTGA
PROTEIN sequence
Length: 105
MTTLTKADLAELLFEKVGLNKREAKDVVESFFDEIRLSLEKGDIVKLSGFGNFQCREKPQRPGRNPKTGEEMPISARRVVTFHASQKLKSQVEGAQIGTPTSPE*