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SCNpilot_expt_1000_bf_scaffold_270_6

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(3952..5334)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UF06_MYXSD similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 471.0
  • Bit_score: 304
  • Evalue 1.90e-79
GntR family transcriptional regulator {ECO:0000313|EMBL:KFA93046.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.1
  • Coverage: 468.0
  • Bit_score: 319
  • Evalue 1.00e-83
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 471.0
  • Bit_score: 304
  • Evalue 6.00e-80

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Taxonomy

Cystobacter violaceus → Cystobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1383
ATGACCTACGAAGAGTGGATCCCGCAGCTTAGTGAGAATGGGGACCCGATCTATCGGCGCATCGTGTCGGCGATCGTTGACGATATCGCACAACAACGGCTGCGCCCCGGCATGCGTATGCCGGCGCATCGCGAGCTGGCGGATCAGCTGAACATCAATGTTGGCACCGTCACGCGCGCTTACACCTTGGCACGCGAGATGGGACTTCTGTCCGGAGAGATCGGCAGGGGTACATTCATCAACGCCCCCTCGCCAACGGAGCATGCCGTTGACGGAGGGCCGGCCGTAATCGACCTGATGATCAACAAGCCGCCGGCGTTGGACGACGGCGCGTCATTGCGTAAGGCGCTGAGCCAGATCGCCGAAGGGTTCTCGGTCACCCAGTTCCTGGAATATCCGCCTTCGAACGGGCAGGAGCGGCATCGCCTGGCGGCTACCAAGCTTGCGCAGATGACCGGTGTGGAGGCCAGTGTCGACCAGGTCGTGTTGTCCAACGGCGCGCAGCAAGCCTTGATGGCAGCGGTATCTTCATGTGTCGCACCGGGGGGCGTTCTGGCGACTGAGGTACTGAACTATGTGGGAATTCGTCGTCTGGCAGAGTTCCTGCGATTGCGGATTGCTGCGGTCGCAATCGACGAGCATGGCATGCTGCCAGACAGTTTTGAGCGGATCTGCCGCTCAGAAAAGGTCTCGGTCCTGGTTGTTACACCCTCAATACACAACCCCACCACCGCCACTTTATCGTTGGAACGTCGGCGGGAAATTGTACGCATTGCTGGTCACTATGGCGTGCCGATCGTCGAGAACGACATTTACGGCGCCCTGATCGAGAAGCCGGACCCTGCGCTGTTCACCATGGCGGAGACACCATGCTGGTACATCTGCGGCCTCTCGAAGGCGGTCAATTCGGGCATCCGCGTCGGATATGCCATTGCACCGGCTGAAAGTATTGGACAGGCGATGTCGGCGATCCATGCTTCCACCTGGACCGTCGCGCCTCTGATGCTGGAAATCGCGAGCCAATGGATTTTCGATGGCACCGTGGCCCGTATGATAGCGGGTCACCGGGTCGCCGTTGCCGAGCGCCAGAAGCTGGCCAAAGAGATTCTGGGTGAAACCTCCTTCCACGCGCATCCGCAGAGCTATCATATATGGTTGCCATTGCCGCTGCGCTGGCGTCCTCATGAATTCGTTGAAGCCTGTCTGAAAAACGGCGCCGCGGTTACCTCCGGCGCTCATTTCCAGACCAGCCCGAGCTACGTCCAGAATGCGGTTCGGGTCAGCTTGGGAGCGGAACCCGACATCGAGGTGCTTCGTATCGGCCTCGAACGGTTGCGGCAGACTTTGCAGGCGCCCCTGTCATTGGATGCGATGATTATCTGA
PROTEIN sequence
Length: 461
MTYEEWIPQLSENGDPIYRRIVSAIVDDIAQQRLRPGMRMPAHRELADQLNINVGTVTRAYTLAREMGLLSGEIGRGTFINAPSPTEHAVDGGPAVIDLMINKPPALDDGASLRKALSQIAEGFSVTQFLEYPPSNGQERHRLAATKLAQMTGVEASVDQVVLSNGAQQALMAAVSSCVAPGGVLATEVLNYVGIRRLAEFLRLRIAAVAIDEHGMLPDSFERICRSEKVSVLVVTPSIHNPTTATLSLERRREIVRIAGHYGVPIVENDIYGALIEKPDPALFTMAETPCWYICGLSKAVNSGIRVGYAIAPAESIGQAMSAIHASTWTVAPLMLEIASQWIFDGTVARMIAGHRVAVAERQKLAKEILGETSFHAHPQSYHIWLPLPLRWRPHEFVEACLKNGAAVTSGAHFQTSPSYVQNAVRVSLGAEPDIEVLRIGLERLRQTLQAPLSLDAMII*