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SCNpilot_expt_1000_bf_scaffold_270_18

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 15510..17150

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirD4 component n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5U0Q0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 36.6
  • Coverage: 541.0
  • Bit_score: 304
  • Evalue 1.70e-79
  • rbh
TraG_1 protein {ECO:0000313|EMBL:KIT16375.1}; TaxID=935700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia aquimarina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 556.0
  • Bit_score: 531
  • Evalue 1.20e-147
Type IV secretory pathway, VirD4 component similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 541.0
  • Bit_score: 304
  • Evalue 5.40e-80
  • rbh

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Taxonomy

Jannaschia aquimarina → Jannaschia → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1641
ATGGCAAACGATCCGCAGCGGGGATCATCGCTCAGCATGTTCGCGCTGGCCGCAGGCTGTGTCTGGGGCGCGTGGGCGGTGCCGAACGATGCGGCGCAATGGCTGCTCGGCGCGACCAGCGTGATCGCCGTGATCTCGGGCTCTGACCGGCTACGGGCGGAGATGGACCGGGATCGCAAGCGGCGGGAGGCGGAAACACCAAGCGGCATTTACGGCACGGCGGCGTTCATGACCGGCGATGCCGCCGCGCGAGCCGGGCTGACCGATCCGGCGGGCCTGTTCCTTGGATCGCTCGGTGGCCGATTGCTGTTTCACAATGGCAAGGCGCACCTGATTACCGTTGCACCCGCCCGCAAGGGCAAGGGAATCTCGGTCGTGGTGCCCAACCTGCTGCACTGGCAAGGCAGCGTGTTCGTCACGGACGCGAAGGGCGAACTGGCTGCCGTCACAGCAGCGCACCGCCAGAATACGTTCGGCCAGAAGGTTTTTGTGGTGAACCCCTGGGGTCTGCACGGCCTGCCGCAACACCGCTTCAATCCATTGGCCTATCTGGTCGACCTCGATGATGACGAGGCCGTCCGGCGCGGGTTGACCGAGGAAGTCGCGGCGCTGGCGCTGCAATTGCTCCCGGAGCCGGAGGATGCGCGAAACCGCTATTTCCGAGAGGGCAGCCGCAAGCTGCTCAGGGCGCTGATGCTGCATCTGGCAACGCGCCAAGTGCGGGGAGACTGTACGCTGCCGGAGCTGTGGCGGCTTCTACAGAACAGCGGGAAACTCGACGCCGCACTGGCCGACATGGCCGGTTCCGACGCGCTCTCCGGCGTCGTTGCCGATCTCGCCGATGACATTGCCGGCATTATCGAGAAGAGCCCTGAAGCCTTCCAGAGTTTTGTCGAGGGCGCACGGCAGACCGTGTCGATCTTCGATCCGTCCGGCTGGCTAGCCGACAGCGTCAGTGCTTCCGATTTCTCCTTCGCCGATCTCAAGACCGGGAAGGTCAGCGTCTATCTGGTCGTGCCACCTAAGCGCATCGAAACGCATGGCGCGTGGCTCGGCCTGCTCACCCGGCAGGCGATCAACGATGTCGCCGGCACGCCGGGCGGGAGAAAAGTGCTCTTCATGCTCGATGAGTTCGCCAACATGGGCAAGCTCGCCAGCCTGTCGGAAAGCCTGACGCTGCTGCCGGGACTGGGCGTGCGGGTCTGGATGGTCGTGCAGTCGCTCGATCAGCTTCGCACCGTCTACGGGCGGGAAGCGACGAACACGATCCTGAGTCAGGCGGAAGTCCAGCAGTTTTTCGCGGTCCAGGATCATGGCCTGACGAAAATGCTGTCGGACGCGCTCGGCCAGCGGACGGTCAAGACCGCCTCCATCAATCTCGGGCGCAAGGAGGACGACGATCCCGGCGAAAGCAAGAGTGAGACCGGACGGCCGCTGATGAGCCCGGACGAAATCCGCCTTATGCCGGACACCGAGCAACTGCTGCTGATCCAGTCGCAGCCGCCGATCCGAGCGCGGCGTGTGCCCTTCTGGGAGGTCGCGCCGTGGCGCGACTGGGCCGCCCCCAATCCGGTCGAGGGCACCCATCCGCGCCCGGAGCCTTCATTTCGCCTGAACTACAAGGAGAAGCCCTATGTCTGA
PROTEIN sequence
Length: 547
MANDPQRGSSLSMFALAAGCVWGAWAVPNDAAQWLLGATSVIAVISGSDRLRAEMDRDRKRREAETPSGIYGTAAFMTGDAAARAGLTDPAGLFLGSLGGRLLFHNGKAHLITVAPARKGKGISVVVPNLLHWQGSVFVTDAKGELAAVTAAHRQNTFGQKVFVVNPWGLHGLPQHRFNPLAYLVDLDDDEAVRRGLTEEVAALALQLLPEPEDARNRYFREGSRKLLRALMLHLATRQVRGDCTLPELWRLLQNSGKLDAALADMAGSDALSGVVADLADDIAGIIEKSPEAFQSFVEGARQTVSIFDPSGWLADSVSASDFSFADLKTGKVSVYLVVPPKRIETHGAWLGLLTRQAINDVAGTPGGRKVLFMLDEFANMGKLASLSESLTLLPGLGVRVWMVVQSLDQLRTVYGREATNTILSQAEVQQFFAVQDHGLTKMLSDALGQRTVKTASINLGRKEDDDPGESKSETGRPLMSPDEIRLMPDTEQLLLIQSQPPIRARRVPFWEVAPWRDWAAPNPVEGTHPRPEPSFRLNYKEKPYV*