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SCNpilot_expt_1000_bf_scaffold_962_1

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(25..1368)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE1A54 related cluster n=1 Tax=unknown RepID=UPI0003CE1A54 similarity UNIREF
DB: UNIREF100
  • Identity: 35.5
  • Coverage: 488.0
  • Bit_score: 226
  • Evalue 6.40e-56
Chemotaxis protein MotD {ECO:0000313|EMBL:ESY21880.1}; TaxID=1287275 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC395A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.5
  • Coverage: 488.0
  • Bit_score: 226
  • Evalue 8.90e-56
chemotaxis protein MotD; K10565 chemotaxis protein MotD similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 472.0
  • Bit_score: 211
  • Evalue 6.70e-52

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Taxonomy

Mesorhizobium sp. LNJC395A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1344
ATGACCGTCAGTATCGGCAACACCCTCCCCGGCTCGTTTGGAGGCAAGTCCGTCGTGCAGGCCAATGCCGACAACAGCGACAGCAGTTTTCAGGATGTGCTGGGCGACAACAAAGGTCATGCCAGCGCCAGGCACGCGGCGGACCACCCTCACCGATCGCGGGGCGCTATCCTGCACCGCGTGGTGCCAGATGGTGAACATCATAGCGCCCGGATTGCCAAGGAAGAGATCACGAACGAAGCCGATGGCGACAAAACCGCTCGCTTCCTATTCACGCCTGGCAAGGCCATCCGAATGGATGACGACAAAACACACAAGACAACGGAAAAGCACGGTGATGCAACTCCCGGCAGTGCCGCGCACGAGCGTTTGCCTCTGCTCATGAGCTTGCAGGAAATCAACCGCGCCTCGTCGCTCGGTGACAAGCAAGGCCCAACTGGCAATACAATCAGCAACACCGCAGAAGATGACGGCACGCCCGGATCGCTCCGCGCTGCGGAAGCAATCCTCCCGGACATTGATCCGGAACTACAGGAAAAGAAGCCGATCAAAACCGAAGGTCCGCGCAACATCGAAATTCAACAACCGGCATCGAAGCCAGCGATCCAGGCGACAATTGCCGTTGACCCGCCGAGAGAACCGGAAACGTCGGTGAGCGACGGCGATAGAAAATCAGTCGCCGTGGCCAATTTGGTCGAAGCTACACATACGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCAACGCATGAGCGCGTCGCCGTGGTGTCTGCGCAGAGTTTCCCGGCACCCGCGGTACCGGGCCTTGACCCCACCACCTCGCGCTTGGTCGCCGCGATAGCTTCCGACATCGGGGCGCAGCAAACGCAGGCAAGTGCGGCCTCGGCGCCAACCGTGCCTCATCAGGCTCCGACCGTGGCGCACACATTAAAGATCGAACTCCATCCCGCAGAACTTGGGATGGTGAATGCAAGTCTGCGCCTCGTCGGAGAACAACTTTCGATTGAATTGTTGCCCGACACTCAAGAGGCCTATCGTCGTCTTTCATCGGATGGCGACACCATCGCACGCGCCTTGCGTGATCTGGGCTTCGATGTCGGCAAGATTACCGTTCTACAACCTACAATAGCAGTTGCACCCGCGCCTCGCACTGATGCCGGAGGTTCCGCGACAGCCCTCCCCAACCGTGATTCATCGTCGTTCCAATCCGGGCAATCAGGCAGCAATGGCAACGGCTCCGGCGAACATCATTCGGGAAGAAGCAACGACAATGACGCGCACAATTCCGGCCGCCCTGCCTCGACTGCTCGCGGCCGCACTGACAGCGGGCTTGTTATCTAG
PROTEIN sequence
Length: 448
MTVSIGNTLPGSFGGKSVVQANADNSDSSFQDVLGDNKGHASARHAADHPHRSRGAILHRVVPDGEHHSARIAKEEITNEADGDKTARFLFTPGKAIRMDDDKTHKTTEKHGDATPGSAAHERLPLLMSLQEINRASSLGDKQGPTGNTISNTAEDDGTPGSLRAAEAILPDIDPELQEKKPIKTEGPRNIEIQQPASKPAIQATIAVDPPREPETSVSDGDRKSVAVANLVEATHTTXXXXXXXXXXPTHERVAVVSAQSFPAPAVPGLDPTTSRLVAAIASDIGAQQTQASAASAPTVPHQAPTVAHTLKIELHPAELGMVNASLRLVGEQLSIELLPDTQEAYRRLSSDGDTIARALRDLGFDVGKITVLQPTIAVAPAPRTDAGGSATALPNRDSSSFQSGQSGSNGNGSGEHHSGRSNDNDAHNSGRPASTARGRTDSGLVI*