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SCNpilot_expt_1000_bf_scaffold_962_20

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(18125..19465)

Top 3 Functional Annotations

Value Algorithm Source
Probable sigma-70 factor, ECF subfamily n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98HH3_RHILO similarity UNIREF
DB: UNIREF100
  • Identity: 85.0
  • Coverage: 419.0
  • Bit_score: 701
  • Evalue 5.20e-199
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 419.0
  • Bit_score: 701
  • Evalue 1.60e-199
Probable sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:BAB49893.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 419.0
  • Bit_score: 701
  • Evalue 7.20e-199

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1341
ATGACCGATCCTGCCTGGATCAGTTCTGCGCTCAATGCAGCTCGCCCGCAGGCCATGGGCGCGCTGCTGCGCTATTTCCGTAACCTCGACACCGCTGAAGAGGCGTTTCAGGATGCGTGCCTGCGGGCCCTGAAGAATTGGCCCCAGAACGGCCCGCCGCGAGATCCGGCGGCATGGCTGATCTTTGTCGGACGCAACAGCGGCATCGACGCAGTGCGAAAACTCAGCCGACAAACGGCGATGCCGGACGAAGACCAGATTTCCGATCTTGAAGATGTCGAGGGTGATATCGCAGACCGGCTCGACGGTGCTCACTACCGCGACGACATCCTGAGGCTCCTGTTCGTCTGCTGCCATCCCGATCTGCCCGCAACGCAGCAGATCGCACTTGCCCTGCGCATCGTGTCGGGTCTCAGCGTCAAGCAGATTGCCCGCGCCTTTCTGGTTGGCGAAAGCGCGATGGAACAGCGCATTACCCGCGCCAAGGCACGTATTGCCAATGCCGGCGTACCATTCGAAACCCCGGGGCCGGTCGAACGGTCGGAGCGGCTCGCCGCGGTTGCCGCCATGCTCTACCTAGTCTTCAACGAAGGCTATTCGACCACGACCGGCGAAGCGGCGGCCCGGGCCCCTCTCTGCGACGAGGCCATCAGGCTGGCAAGATTGCTGCTGCGGCTGTTCCAGACCGAGCCGGAAATCATGGGCCTGACCGCCCTGATGCTGCTTCAGCATGCCCGCGCCCCGGCCCGCTTCGATGCCGATGGCGAGATCGTTTTGCTGGAAGATCAGGATCGAACCCTGTGGAGCCGCAAGATGATCGACGAAGGGCTGGCGCTTGTCGACAAGGCGCTGAGGCATCGCAAGCCCGGACCCTACCAGGTGCAGGCCGCAATTGCTGCCCTTCACGCCCGCGCGGCAAGAGCCGAGGATACTGACTGGCGGGAAATTGAACTCCTCTACGGCATGCTGGAACGGATGCAGCCTTCACCCGTGGTGACGCTGAACAGGGCCGTAGCCGTGGCCAAGGTGCACGGACCGGAAGCGGCACTTGCCGTAGTCGAACCGCTTGAAGAGCGCCTGTCCGGTTACTTCTATTTCTTCGGCCTCAAGGGTGGCCTGTTGATGCAGCTTGGCCGCAGCGAAGAAGCGCGCACGGCATTTGACCAGGCGATTGCGCTTGCCCCAGCACATCGACCGGTTGACGAAGGAAGCGGACGCCCACCGCGTCCGGCATTCCGCCGTTCCACACTGATTCCCACATCAAAACGTCTATATCTGGTTCAATCGACCAGGGTTCGCTGGGGCCATGCCGGGGTGGCGGTCGGCTGCCGAAAAGGGTAA
PROTEIN sequence
Length: 447
MTDPAWISSALNAARPQAMGALLRYFRNLDTAEEAFQDACLRALKNWPQNGPPRDPAAWLIFVGRNSGIDAVRKLSRQTAMPDEDQISDLEDVEGDIADRLDGAHYRDDILRLLFVCCHPDLPATQQIALALRIVSGLSVKQIARAFLVGESAMEQRITRAKARIANAGVPFETPGPVERSERLAAVAAMLYLVFNEGYSTTTGEAAARAPLCDEAIRLARLLLRLFQTEPEIMGLTALMLLQHARAPARFDADGEIVLLEDQDRTLWSRKMIDEGLALVDKALRHRKPGPYQVQAAIAALHARAARAEDTDWREIELLYGMLERMQPSPVVTLNRAVAVAKVHGPEAALAVVEPLEERLSGYFYFFGLKGGLLMQLGRSEEARTAFDQAIALAPAHRPVDEGSGRPPRPAFRRSTLIPTSKRLYLVQSTRVRWGHAGVAVGCRKG*