ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1553_13

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(10686..12872)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF2F67 related cluster n=1 Tax=unknown RepID=UPI0003CF2F67 similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 692.0
  • Bit_score: 1022
  • Evalue 2.20e-295
  • rbh
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:ESY83467.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 692.0
  • Bit_score: 1022
  • Evalue 3.00e-295
AMP-dependent synthetase and ligase similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 690.0
  • Bit_score: 1013
  • Evalue 2.40e-293
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LNHC221B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2187
GTGACGGCGCTCCCGACGGCCGGCACCAAAGGCCGCGACACGACCGGCGAGGCGAAATCAGGGGAGGCGAAATTGGCCAAGGCAAGCAACAAGGGTTCGGCGGGCGGCAAGAGCGTTGTCCGCAAAGCCGCTGCGAAACCGGCCAAGCTGGCTTCAGCGAAGGCTCCGGCCGCCAAGGCTGCGGTGAAGGCTGCGGCTCCCAAGGCGCCCGCTGCGAAGGCAGCGCCCAAGGCTGCCGACAAGACCGTATCGAAGGCCAGCTCGGCCAAGCCGTCGCCAAAGGCGGCGACTAAACCTGCAGCGCCAAATTCCAAGCCGGCCGCCGCCAAGCCCGCGGTCGTGAAAGCAGCCGCGAAAAAGCCTGCCCCCGAAAAGTCTTCTGCCCAAAAGCCAGAGACGAAGAAAACCGAGCCCAAGAAAACCGAAGCCAAGAAGCCTGCCCCGCAGAAATCTGCTCCAAGGAAAACGGCAGCCGAAAAGCCGTTGCCCAAGACCATTACCAGGCTGACCGCCGGCTTGCCGCAAAAGCCGTGGCTCGCCAGCTACCCGCGCAACATGCCGTCGGAGATCGGCCCGATGCCGTCGCCCTCGATCGGCGACCTACTTGCCACCGCTTGCCAGCAGTTTTCCGGCAATCCCGCCTTCACCTGCATGGACAAGACGCTCACCTTTGCCGAACTCGAGCGCCTGTCGTCGGCCTTCGGCGCTTTCCTGCAATCGAAGGGCCTCAGAAAGGGCGCGCGTGTCGCGCTGATGATGCCCAACATCCTGCAATACCCGGTCGCCATGATGGCGGTGCTGCGGGCAGGCTATGTCGTGGTCAACGTCAACCCGCTCTACACGCCGCGTGAACTCGAACACCAGTTGCGGGACTCTGGCGCGGAAGCCATCGTCATTCTGGAAAACTTCGCCGCGACTTTGCAGGCGGCCATCGGCAAGACCCTGGTCAAGCACGTGGTCGTGGCCTCTATGGGCGAACTGCTCGGCGGCCTGAAGGGCACGCTGGTCAACCTTGTCGTTCGCCGCGTCAAGAAGCTCGTTCCGGCCTGGTCGCTGCCCGGTCACATCAAGTTCAACGCCGCGATGAAGGCAGGCGCCGGCCTTGCCTTCAAGCCGGCCGAAGTGTCGCCCGACGACACCGCCTTCCTGCAATATACCGGCGGCACCACCGGCGTTTCCAAGGGCGCGACGCTGCTTCACCGCAACGTCCTTGCCAATGTCGCCCAGCTCGCGCTGTGGGTGGAAGACGCCTACGCGGTGAAGCCGAAGCCGGCCCATCTCATCTATGTCTGCGCGCTGCCGCTCTATCATATCTTTGCGCTGACGGTGAACGCGCTGATGGGCATGCAGCAGGGCGCGCACAATTTGCTCATCCCCAACCCGCGCGACATTCCGGGCTTCGTCAAGGAACTGCGCAAATATTCCTTCAACATCTTCCCCGGCCTCAACACGCTGTTCAACGCGCTGCTCAACAACGAGGACTTCCGCAAGCTCGACTTCAAGCCGCTCATCCTGAGCCTCGGCGGCGGCATGGCCGTGCAGAAGGGCGTGGCCGACCGCTGGAAGGCGCTGACCGGAAACCACATCACCGAAGGCTACGGCCTGTCCGAGACCTCGCCGGTCGCGACCGCCAACAAGTGCAGTTCGCCGGACTTCACCGGCACCATCGGCCTGCCCATTCCTTCGACCGAGATCGCCATACGCGACGACGAGGGCGCCAACCTGCCGCTCGGCGAGGTCGGCGAAATCTGCATCAAGGGGCCGCAGGTCATGGCGGGCTACTGGAACCGGCCCGACGAGACCGCCAAGGTGATGACCAAGGACGGCTTCTTCAAGTCCGGCGACATGGGCTTCATGGACGAGAAGGGCTTTACCAAGATCGTCGACCGCAAGAAGGACATGATCCTCGTCTCCGGCTTCAACGTCTATCCGAACGAGCTCGAAGAAGTCGTTGCCCAGCATCCCGGCGTGCTCGAGGTCGCCGCCATCGGCGTGCCGGACGAGAAGTCGGGCGAGGTGCCGAAATTGTTCGTGGTCAAGAAGGACCCCGATCTCACCATCGAGACGCTTGCCGCCTACTGCAAGGTCAACCTCACCGGCTACAAGCGGCCGAAATATATCGAGTTCCGCGACGAGCTGCCAAAAACGCCGGTCGGCAAGATCCTGCGCCGGGAACTGAGAGGATAG
PROTEIN sequence
Length: 729
VTALPTAGTKGRDTTGEAKSGEAKLAKASNKGSAGGKSVVRKAAAKPAKLASAKAPAAKAAVKAAAPKAPAAKAAPKAADKTVSKASSAKPSPKAATKPAAPNSKPAAAKPAVVKAAAKKPAPEKSSAQKPETKKTEPKKTEAKKPAPQKSAPRKTAAEKPLPKTITRLTAGLPQKPWLASYPRNMPSEIGPMPSPSIGDLLATACQQFSGNPAFTCMDKTLTFAELERLSSAFGAFLQSKGLRKGARVALMMPNILQYPVAMMAVLRAGYVVVNVNPLYTPRELEHQLRDSGAEAIVILENFAATLQAAIGKTLVKHVVVASMGELLGGLKGTLVNLVVRRVKKLVPAWSLPGHIKFNAAMKAGAGLAFKPAEVSPDDTAFLQYTGGTTGVSKGATLLHRNVLANVAQLALWVEDAYAVKPKPAHLIYVCALPLYHIFALTVNALMGMQQGAHNLLIPNPRDIPGFVKELRKYSFNIFPGLNTLFNALLNNEDFRKLDFKPLILSLGGGMAVQKGVADRWKALTGNHITEGYGLSETSPVATANKCSSPDFTGTIGLPIPSTEIAIRDDEGANLPLGEVGEICIKGPQVMAGYWNRPDETAKVMTKDGFFKSGDMGFMDEKGFTKIVDRKKDMILVSGFNVYPNELEEVVAQHPGVLEVAAIGVPDEKSGEVPKLFVVKKDPDLTIETLAAYCKVNLTGYKRPKYIEFRDELPKTPVGKILRRELRG*