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SCNpilot_expt_1000_bf_scaffold_1423_14

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(12817..13809)

Top 3 Functional Annotations

Value Algorithm Source
Arabinose ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G710_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 330.0
  • Bit_score: 608
  • Evalue 4.40e-171
  • rbh
L-arabinose-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR002816}; Short=ABP {ECO:0000256|PIRNR:PIRNR002816};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 330.0
  • Bit_score: 611
  • Evalue 7.30e-172
periplasmic binding protein/LacI transcriptional regulator; K10537 L-arabinose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 330.0
  • Bit_score: 605
  • Evalue 1.20e-170
  • rbh

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGCGATTGTTGAATAAGGCGCTCATTGCTGGCGCCCTTGCCGTGCTGTCCGTCACCACCATCGCTTCTGCCTATGCGCAGGAGACCAAGATCGGCTTCATCGTGAAGCAGCCCGAAGAGCCGTGGTTCCAGGACGAGTGGAAGTTTGCCGACCAGGCAGCCAAGGAAAAGGGCTTCACGCTGGTGAAGATCGGCGCCGAGGATGGCGAAAAGCTGATGTCGGCTATCGATAACCTTGGCGCGCAGGGTGCGCAGGGCTTCGTTGTCTGCACGCCGGATGTGAAACTCGGACCTGGTATTGTTGCCAAGGCTGCCGCCAACAACCTGAAGCTGATGACCGTTGACGACCGGCTGGTCGGCGCGGACGGCAAGCCGATTGAAGAAGTGCCGCATATGGGCATCTCCGCCACCAAGATTGGCGAAGCGGTTGGTCAGGCGATTGTCGACGAGATGAAGGCACGCGGCTGGAATGCCGACGAAGTTGGCGCGATCCGCGTTTCCTATGACCAGCTGCCAACGGCGGTTGATCGTGTCGAGGGCGCGATTTCGGTGCTGAAGGCAAACGGCTTCAAGGCCGAGAACATCTTCGACGCTCCGCAGGCCAAGACCGACACCGAAGCAGCGCTCAACGCTGCGACGGTTGTTCTCAACAAGAACGCCAACATCAAGAAGTGGGTGGCGTTCGGCCTTAACGACGAGGCTGTGCTGGGTGCGGTGCGCGCTTCCGAAAGCGTCGGCATTCCGGCGGACGGCATGATCGGCGTCGGCATCGGTGGTGCGGACTCGGCGATCAACGAATTCAAGAAGCCGACCGCTACCGGCTTCGTCGGTTCGGTGATCATCTCGCCGAAGCGCCACGGCTACGAAACCGCGCTCAACATGTATGACTGGGTCGCTAACAACAAGGAGCCGGAGAAGCTGATCCTCACCGCCGGCGCCCTTGCGAAGCGCGGCGACTACGAAGCGGTGCGCAAAGACCTCGGCATCGAGTAA
PROTEIN sequence
Length: 331
MRLLNKALIAGALAVLSVTTIASAYAQETKIGFIVKQPEEPWFQDEWKFADQAAKEKGFTLVKIGAEDGEKLMSAIDNLGAQGAQGFVVCTPDVKLGPGIVAKAAANNLKLMTVDDRLVGADGKPIEEVPHMGISATKIGEAVGQAIVDEMKARGWNADEVGAIRVSYDQLPTAVDRVEGAISVLKANGFKAENIFDAPQAKTDTEAALNAATVVLNKNANIKKWVAFGLNDEAVLGAVRASESVGIPADGMIGVGIGGADSAINEFKKPTATGFVGSVIISPKRHGYETALNMYDWVANNKEPEKLILTAGALAKRGDYEAVRKDLGIE*