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SCNpilot_expt_1000_bf_scaffold_2084_23

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 21134..22657

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF687F related cluster n=1 Tax=unknown RepID=UPI0003CF687F similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 509.0
  • Bit_score: 809
  • Evalue 2.00e-231
  • rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 509.0
  • Bit_score: 809
  • Evalue 2.80e-231
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 509.0
  • Bit_score: 806
  • Evalue 4.10e-231
  • rbh

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Taxonomy

Mesorhizobium sp. LNHC221B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1524
ATGGCGCTCGCGGCCAAGCTACAGCTGAGACAGGCGCAGTCGCTGGTGATGACACCGCAACTGATGCAGTCGATTCGTCTGCTGCAGTTCACGCAAGCTGAGCTTGAAAGGTTCATCGACGAGGAAATCGAGCGCAATCCGTTGCTGGAGCGGGCTGAACCTCAAGATGCCATCATCAACGACCCGGAGCCTGCCGCCGAACCTTCCCAAGCAGCGGCGGACGATGACTGGTTCGATAATGAGGGCGCGTGGACGTCGGAAGCGATCTCCGACAAATTGGACACTTCGCTGGAAAACGTGTTCCCGGACGATCCGGGCACCAGCGAACGCCTGGGCCCGGACCTTGCGGCTCAATGGAAATCGACATCGGGCAACGGTTCCGGCGGAGCCTCCGAAGGCTTCGACATGGAGGATATGGCTGCCGCCGCGGTCACGCTGCGCGACCATGTCGGCGAACAGATCGCCTTTGCGTTCAGCAGTCCGGCAGATCGTCTGATTGCCGCCGAACTTGCCGATGGTCTCGACGAAGCCGGCTATCTGCGCGCTGAACTCAGCGAAGTTGCAGGAAGACTTGGCGCCGATCTTGAGACGGTTGAGCGGGTTCTATCCACCTGCCAATCGTTCGATCCGGTCGGCATATTTGCGCGCGAGCTTGCCGAATGCATTTCGCTCCAGCTTGCCGCGCGCGACAGGCTGGATCCGGCGATGCAGGCACTCGTGGCCAATCTCGACCTTTTGGCGCGCCGGGATTTTCAGGCGCTGCGGCGCATCTGCGGCGTCGACGAGGAAGATTTGCTCGACATGCTGGCTGACATCAAGGCGCTCGATCCACGCCCTGGATTGGCATTTTCGGGCGGCGTCAGCGATGCCATCGTTGCGGATGTCGAAGTCAGGCCCGCCAGCGACGGCAGTTGGGCAGTCGAGCTCAATCCCGACACCTTGCCACGCGTTCTGGTCGATCAGGTCTATTTCGCACAAGTTTCCGGTCACGCCAGAAGTCAGGGCGAGAAAGATTTCCTCAGCGAATGTCTCCAAAGCGCCAACTGGCTGACGCGCAGCCTCGACCAGCGAGCGAAAACCATCCTCAAGGTGACCTTAGAGATCGTTCGACAGCAGGACGCGTTCCTGGTCCATGGTGTCCGCCACTTGAGGCCCCTCAATCTCAAAACCGTGGCGGATGCCATAGGCATGCACGAATCGACCGTCAGCCGGGCAACTGCCAACAAATACATGCTGACGCCGCGCGGCGTCTTCGAGCTGCGCTATTTCTTCACGGCAGCGATTGCGGCTTCGAGCGGCGGCGAAGCGCACTCGTCCGAGGCGGTACGCGACCGCATCAAGCAGATGATCGACGAGGAGCAGGCGAGCGACGTGCTTTCCGATGACACGATTGTCGATCTGCTCAAGGCTGATGGCATAGATATCGCGCGCCGCACGGTCGCCAAGTACCGGGAAGGTATGAATATTCCTTCGTCGGTGCAGCGCCGTCGCGAGAAAAGGGCGATTGCGAAGGCGGCGCACTGA
PROTEIN sequence
Length: 508
MALAAKLQLRQAQSLVMTPQLMQSIRLLQFTQAELERFIDEEIERNPLLERAEPQDAIINDPEPAAEPSQAAADDDWFDNEGAWTSEAISDKLDTSLENVFPDDPGTSERLGPDLAAQWKSTSGNGSGGASEGFDMEDMAAAAVTLRDHVGEQIAFAFSSPADRLIAAELADGLDEAGYLRAELSEVAGRLGADLETVERVLSTCQSFDPVGIFARELAECISLQLAARDRLDPAMQALVANLDLLARRDFQALRRICGVDEEDLLDMLADIKALDPRPGLAFSGGVSDAIVADVEVRPASDGSWAVELNPDTLPRVLVDQVYFAQVSGHARSQGEKDFLSECLQSANWLTRSLDQRAKTILKVTLEIVRQQDAFLVHGVRHLRPLNLKTVADAIGMHESTVSRATANKYMLTPRGVFELRYFFTAAIAASSGGEAHSSEAVRDRIKQMIDEEQASDVLSDDTIVDLLKADGIDIARRTVAKYREGMNIPSSVQRRREKRAIAKAAH*