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SCNpilot_expt_1000_bf_scaffold_2544_15

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(11200..11967)

Top 3 Functional Annotations

Value Algorithm Source
Peptidase S54 n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FS69_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 239.0
  • Bit_score: 353
  • Evalue 1.50e-94
Peptidase S54 {ECO:0000313|EMBL:EZQ15327.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 242.0
  • Bit_score: 370
  • Evalue 1.70e-99
Rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 241.0
  • Bit_score: 309
  • Evalue 7.90e-82

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
TTGTGTAACGGCGGGCAGTGNNNNNNNNNNNNNNNNNNCGAGCCGGAAGGCATTGAAGCTAGCGGCGAGACGAGGCCCCAGGCCGCGCCGCCGCGCGAGCCGGTGTTCAACCTGCCGGCCGTGGTGGTGGGAGTGATGGCGCTGTGCATCGGCATCCATCTCATCAGGACATACGCTCTGACCCCGGATCAGGATTTCGAACTGCTGGTGCGCGCGGCGTTCGTTCCGATCCGCTATTCGGGCCAGTATGAAATCGACGTCTGGGCCTTCACCAGCCCGTTCACCTATGCGCTCTTGCATGGCGGTTTCGCCCACTTGATCATCAATATGGTGTGGCTGGCCGCCTTCGGCTCGCCGCTGGCGAACCGCATCGGCGTCATGCGCTTCATTGTCTTCTTCGCCGTAACGGGCCTTGCGGCGGCAGGGTTGTTCTACATCATCCATCCAGACGGCCAGTCACCGCTGGTGGGCGCTTCAGGTTCGATCTCCGGCATGATGGGGGCGGCAGCGCGCTTTGCCTTTCGCATCGACCGCTCGTCGGGCAAGGCGGCGTTTGCGGGCGCGCCGCTGCCGATGCGCGATGTGTTGCGATCACGCGGCACGATGACCTTCCTTGCCGTATGGATGGTGGTCAATCTGGCAACGGGGCTGATCGGACTGGCGCCGGGCGATGAGAGCCAGATCGCCTGGGAGGCGCATATCGGCGGCTTTGCCGCCGGCTTCTTCGGGCTGAGGCTGTTCGAAAAAGGTGCCTGGAAGCGCGCCTGA
PROTEIN sequence
Length: 256
LCNGGQXXXXXXXEPEGIEASGETRPQAAPPREPVFNLPAVVVGVMALCIGIHLIRTYALTPDQDFELLVRAAFVPIRYSGQYEIDVWAFTSPFTYALLHGGFAHLIINMVWLAAFGSPLANRIGVMRFIVFFAVTGLAAAGLFYIIHPDGQSPLVGASGSISGMMGAAARFAFRIDRSSGKAAFAGAPLPMRDVLRSRGTMTFLAVWMVVNLATGLIGLAPGDESQIAWEAHIGGFAAGFFGLRLFEKGAWKRA*