ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2907_13

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(9849..11045)

Top 3 Functional Annotations

Value Algorithm Source
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E2B188 similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 398.0
  • Bit_score: 739
  • Evalue 1.50e-210
  • rbh
branched chain amino acid ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 399.0
  • Bit_score: 700
  • Evalue 2.50e-199
  • rbh
Branched-chain amino acid ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:AFL52996.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 399.0
  • Bit_score: 700
  • Evalue 1.10e-198

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGATTAACAGACGCACTGCTTTGAAGTCTCTGGCACTCGGCGCTGCCTCCACACTTGCCATTGTCGGCGCTCTCTCTTCGGCCCACGCCGAAAACAAGACCCTCAAGATCGGTTTCGTTGGCGTGACCAGCGGTCCGGCCGCAGCCTGGGGAACATCGAATGTTCGCTCCATGCAGGTTCGCGCCGACTGGATCAATGAAAAGGGCGGCGTCAAGATCGGCGACGACACCTACAACATCGAACTGGTCACCTTCGACGACCAGAAAGACCCGAAGCGCGCAATCGCCGGCATGGAAAAGATGGCGCAGGAAGGCATTCATTACGTCGTAGGCCCGAACGTCGATGACGGCGCGGCCGCCGTCCGCCCGGTAGCGGAAAGCAAGGGGATCATCTACTTCCCGTATGCATTCCCCAAGGCGCTCTATACCCCGCCGGCCTCGAATGCCGTTCTGGGCATGGTCGCCAACTACCAGTCCGCCCCCGCGATCTATAAGTACCTCAAGGAAAACAAGGGCGTTAAGAAGATCGCCTTTGTTGCCGCCAATGAATCCGACCCGCTCAGCCAGCGCGACGGCGGTGTCGAAGCTGCCAAGGCGCTTGGGCTGGAAATCGTCGCGCAGAACGACACCTACCCGAACGACACCCGCGACTTCACGCCTGTGATGACGCCGATTGTCCAGCAGAAGCCGGACCTGCTCGTACTTTCGGGCGTTGCTCCGGCCAACGCGCCCCTGCTCATTCGTGCGGCGCGCGAGCTTGGCTATGAAGGACTGATTTCGGCTGAAACGGCACAGGACGCCACCGTGCTTCAGGAAGGTGCCGGCGAGCTTGCCAACGGCTTCATCTCGGTCGGCGGCGCCTCGACCCCGGAAATCAGGTCGGCGGAAATGGACGAGTTCATCGACCGCTATACGAAGAAATATGGCGAGTACAACGACGAGTCCAACACCAAGGTCTATGCCCTCGACTACATCGTTGAAACGCTGAAGGCCAACCCGGCTGCGATCGACAATGTCGAGGAATACAAGAAGACGATGGACACCTTCTCCGCGCCCAATCCTTTCGTGAAGGAAGGCACGTTGAAGTATGTCGGCCAGACGTCGTTCACCCAGAAGCGCCAGATTTCGGTGCCGATGGTGGTGACCGAATTCAAGGACGGCAAGTTCGAGACCCTGTTCGTCGGCGAAGTCGACTGA
PROTEIN sequence
Length: 399
MINRRTALKSLALGAASTLAIVGALSSAHAENKTLKIGFVGVTSGPAAAWGTSNVRSMQVRADWINEKGGVKIGDDTYNIELVTFDDQKDPKRAIAGMEKMAQEGIHYVVGPNVDDGAAAVRPVAESKGIIYFPYAFPKALYTPPASNAVLGMVANYQSAPAIYKYLKENKGVKKIAFVAANESDPLSQRDGGVEAAKALGLEIVAQNDTYPNDTRDFTPVMTPIVQQKPDLLVLSGVAPANAPLLIRAARELGYEGLISAETAQDATVLQEGAGELANGFISVGGASTPEIRSAEMDEFIDRYTKKYGEYNDESNTKVYALDYIVETLKANPAAIDNVEEYKKTMDTFSAPNPFVKEGTLKYVGQTSFTQKRQISVPMVVTEFKDGKFETLFVGEVD*