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SCNpilot_expt_1000_bf_scaffold_2829_14

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 12754..13938

Top 3 Functional Annotations

Value Algorithm Source
amino acid ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI000374FB9D similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 384.0
  • Bit_score: 571
  • Evalue 9.30e-160
  • rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:EZQ15127.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 394.0
  • Bit_score: 665
  • Evalue 3.90e-188
polar amino acid ABC transporter inner membrane subunit; K09970 general L-amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 393.0
  • Bit_score: 567
  • Evalue 3.20e-159

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
GTGGCACAAGAGGCAATTCACGAAGCGCCCGCAAGGGCGTCGTTGATCTATGACCCGAGGGTCCGGGGCATAGTCTTCCAGATAATTCTGGTCGCGCTGCTAGCAGCAGGCATTTGGTGGATCGTAGACAATACGATCGAAAATCTGCGTCGCTCCAACATTACAACCGGCTTTGCGTTCCTGCGAGGAAGGGCGGGTTTTGACATTTCCGATCGGTTGATCGAGTACAGTTCAGACTCGTCCTACGGTCGCGCGCTCATTGTCGGTGTGCTCAATACCGCTGCCGTCGCGGCGGCTGGCATCGTAACGGCTACGATCCTTGGGTTCCTTGTTGGCGTTGGGCGGTTGTCGAACAATTGGCTGATCCGCAAGCTGGCGACGGCTTACGTAGAGCTTTTCCGCAATATTCCGCCGCTGCTGGTGATCTTGTTCTGGTACCAAGGAGTATTGGCGCTTCTACCCAGCGTACGCGACAGCGTTTCTCTCCCACTTGGATCGTATCTCAACAATCGCGGCTTTTATCTTCCGCGCTTTGTTTGGGAGCCGGGTTCGTGGCTGATCTTCGCCGGTTTTGTGGTGGGTCTTGCGCTGAGTTGGTATCTGGCTCGGCGTGCGAGAATGCGTCAGATGGCGACCGGCCAGCAGTTTCCGGTGCTTCTCACCAGCATTGCACTCGTAGTGGGTCTACCCTTGTTGGGTTTCTTGGCGGCCGGAATGCCGGTCTCCGTGGATTTCCCGCAAAAGGGTACGTTTAACCTGACCGGCGGAATGAACGTCAAACCAGAGTTCTTGTCGCTCTACCTAGCGCTGTCATTCTATACAGCGGCGTTTATCGCCGAGATCGTGCGTGCCGGCATCATGGGTGTTCCGCGCGGCCAGACGGAAGCTTACTCGGCGTTGGGCCTGCGTTCGAACCTAGGCCTAAGGCTGGTGGTTATTCCGCAGGCAATGCGGATCATTATCCCGCCACTCACAAGCCAGTATCTCAACCTGACCAAGAATTCGTCTCTGGCCGTGGCGATTGGCTACCCGGATTTGTACGCGATCGGTGGGACGATCCTCAATCAAACAGGACAAGCGATTGAGGTCGTTGTCATCTTCATGGTGGTCTACCTGAGCATCAGTATCCTCACCTCCCTTCTCATGAACTGGTTCAACACCAAAATGGCGTTGAAGGAGAGGTGA
PROTEIN sequence
Length: 395
VAQEAIHEAPARASLIYDPRVRGIVFQIILVALLAAGIWWIVDNTIENLRRSNITTGFAFLRGRAGFDISDRLIEYSSDSSYGRALIVGVLNTAAVAAAGIVTATILGFLVGVGRLSNNWLIRKLATAYVELFRNIPPLLVILFWYQGVLALLPSVRDSVSLPLGSYLNNRGFYLPRFVWEPGSWLIFAGFVVGLALSWYLARRARMRQMATGQQFPVLLTSIALVVGLPLLGFLAAGMPVSVDFPQKGTFNLTGGMNVKPEFLSLYLALSFYTAAFIAEIVRAGIMGVPRGQTEAYSALGLRSNLGLRLVVIPQAMRIIIPPLTSQYLNLTKNSSLAVAIGYPDLYAIGGTILNQTGQAIEVVVIFMVVYLSISILTSLLMNWFNTKMALKER*