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SCNpilot_expt_1000_bf_scaffold_3105_4

Organism: SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: 5496..6413

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 305.0
  • Bit_score: 520
  • Evalue 2.00e-144
UPI0003CE0BCA related cluster n=1 Tax=unknown RepID=UPI0003CE0BCA similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 305.0
  • Bit_score: 520
  • Evalue 1.50e-144
  • rbh
indigoidine synthase A family protein similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 305.0
  • Bit_score: 515
  • Evalue 1.10e-143
  • rbh

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGACGCCAGAAAGCGCCCGCCCCTTCATCGACGTCCATGCGCCGGTGGCTAAAGCATTGGCCGCTGGCCGCCCGGTCGTGGCGCTTGAAAGCACGATCATCACCCACGGCATGCCTTATCCCGACAATGGAGCGATGGCTGCCAATGTCGAAAAGATCGTCGCGGACGAAGGGGCCGTTCCCGCCACGATCGCGGTCGTCGGCGGCCGGATCAAGATCGGCCTTTCCGATGGCGAGCGCGAATCGCTGGCCATGACCGGCGATGCGATGAAGCTGTCACGCGCCGACCTCGCCTTCGCCGTTGCCGAAGGGCGCACCGGAGGCACCACGGTTGCCGCAACAATGATCGCTGCGCACATGGCAGGCATCCGGGTTTTCGCTACGGGCGGCATCGGCGGCGTGCATAAGGGCGCAGAAACCAGCTTCGACATTTCCGCAGACCTCGACGAGCTGGCGCGCACGCCGGTCATCGTTGTGTCTGCTGGCGCAAAGGCCATTCTCGATATCGAAAAGACGCTGGAAGTGCTGGAAACGCGCGGCGTTCCGGTGATCGCCCATCGCGCCGAAATCATGCCGGCTTTCTGGTCGCGCCAATCGCCGTTCCGGGCCCCTCTCACGCTGGACAGTGCCGACAAGATCGCCAAACTGTTCCAGACACGGCGGGAACTCGGTCTCGATGGCGGCATGCTGGTGGCGAACCCCGTGCCGCAAAATGACGAGATACCGGCCGGTGAAATGGCCGGCTACATCGAAGCGGCGCAGAAGGCGGCACAGGTGCAAAACGTCACCGGCAAGGCGGTGACGCCATTCCTTTTGTCGAAGATCCTGGAACTGACCGGCGGCCGCAGCCTGAAGACCAACATCGCGCTGGTCGAGAACAATGCGCGGCTGGCGGCGCAGATTGCCAAATCGCTTTAG
PROTEIN sequence
Length: 306
MTPESARPFIDVHAPVAKALAAGRPVVALESTIITHGMPYPDNGAMAANVEKIVADEGAVPATIAVVGGRIKIGLSDGERESLAMTGDAMKLSRADLAFAVAEGRTGGTTVAATMIAAHMAGIRVFATGGIGGVHKGAETSFDISADLDELARTPVIVVSAGAKAILDIEKTLEVLETRGVPVIAHRAEIMPAFWSRQSPFRAPLTLDSADKIAKLFQTRRELGLDGGMLVANPVPQNDEIPAGEMAGYIEAAQKAAQVQNVTGKAVTPFLLSKILELTGGRSLKTNIALVENNARLAAQIAKSL*